Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3996 |
Symbol | |
ID | 5060477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4547645 |
End bp | 4548478 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640476256 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001160804 |
Protein GI | 145596507 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTACA TCACCGTCGG GACCGAGAAC AGCAGCAGCA TCGACGTGTA CTACGAGGAC CACGGTCAGG GACAGCCGGT GGTACTCATC CACGGCTACC CCCTGAGCGG GCACTCGTGG GAGAAGCAGA CCGCCGCCCT CCTTCAGGCC GACTACCGGG TGATCACCTA CGACCGGCGA GGGTTCGGCC AGTCCAGCCA ACCCACCGTC GGCTACGACT ACGACACCTT CGCCGCCGAC CTGAACACCG TCCTGGAGAC CCTCGACCTC ACCGACGTGG TACTGGTCGG ATTCAGCATG GGCACTGGCG AGGTGGCCCG CTACCTGAGC CGCTACGGCT CCGCCCGGGT CGCCAAGGCC GCGTTCCTCG CCTCGCTGGA ACCGTTCCTG CTGCAGACCG ACGACAACCC GACCGGTGTG CCGCAGGACG TGTTCGACGG CATCCTCGCC GCGGTCACCG CTGACCGGTA CGCCTACTTC ACCGACTTCT ACCGCAACTT CTACAACACC GATGACACCC TCGGCAGCCG CCTGTCCGAG GAGGCACTGC GTAACAGCTG GAACGTCGCC GCCGGCGCGT CCTGGTACGC CTCCAGCGCC GCCGTGCCCA CCTGGATCAC CGACTTCCGC GCCGACATCC CGGCCGTCGA CGTACCAACG CTGATCCTGC ACGGCACCGC CGACAACATC CTGCCCATCG ACGCCACCGC CCGCGAATTC CACAAGCGGC TACCCGAGGC CGACTACGTC GAGATCGACG GCGCTCCCCA CGGCCTGCTC TGGACCCACA CGACCGAGGT CAACCAGGCC CTACTGACCT TCCTCGCCAA GTAA
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Protein sequence | MPYITVGTEN SSSIDVYYED HGQGQPVVLI HGYPLSGHSW EKQTAALLQA DYRVITYDRR GFGQSSQPTV GYDYDTFAAD LNTVLETLDL TDVVLVGFSM GTGEVARYLS RYGSARVAKA AFLASLEPFL LQTDDNPTGV PQDVFDGILA AVTADRYAYF TDFYRNFYNT DDTLGSRLSE EALRNSWNVA AGASWYASSA AVPTWITDFR ADIPAVDVPT LILHGTADNI LPIDATAREF HKRLPEADYV EIDGAPHGLL WTHTTEVNQA LLTFLAK
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