Gene Strop_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3996 
Symbol 
ID5060477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4547645 
End bp4548478 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content67% 
IMG OID640476256 
Productalpha/beta hydrolase fold 
Protein accessionYP_001160804 
Protein GI145596507 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTACA TCACCGTCGG GACCGAGAAC AGCAGCAGCA TCGACGTGTA CTACGAGGAC 
CACGGTCAGG GACAGCCGGT GGTACTCATC CACGGCTACC CCCTGAGCGG GCACTCGTGG
GAGAAGCAGA CCGCCGCCCT CCTTCAGGCC GACTACCGGG TGATCACCTA CGACCGGCGA
GGGTTCGGCC AGTCCAGCCA ACCCACCGTC GGCTACGACT ACGACACCTT CGCCGCCGAC
CTGAACACCG TCCTGGAGAC CCTCGACCTC ACCGACGTGG TACTGGTCGG ATTCAGCATG
GGCACTGGCG AGGTGGCCCG CTACCTGAGC CGCTACGGCT CCGCCCGGGT CGCCAAGGCC
GCGTTCCTCG CCTCGCTGGA ACCGTTCCTG CTGCAGACCG ACGACAACCC GACCGGTGTG
CCGCAGGACG TGTTCGACGG CATCCTCGCC GCGGTCACCG CTGACCGGTA CGCCTACTTC
ACCGACTTCT ACCGCAACTT CTACAACACC GATGACACCC TCGGCAGCCG CCTGTCCGAG
GAGGCACTGC GTAACAGCTG GAACGTCGCC GCCGGCGCGT CCTGGTACGC CTCCAGCGCC
GCCGTGCCCA CCTGGATCAC CGACTTCCGC GCCGACATCC CGGCCGTCGA CGTACCAACG
CTGATCCTGC ACGGCACCGC CGACAACATC CTGCCCATCG ACGCCACCGC CCGCGAATTC
CACAAGCGGC TACCCGAGGC CGACTACGTC GAGATCGACG GCGCTCCCCA CGGCCTGCTC
TGGACCCACA CGACCGAGGT CAACCAGGCC CTACTGACCT TCCTCGCCAA GTAA
 
Protein sequence
MPYITVGTEN SSSIDVYYED HGQGQPVVLI HGYPLSGHSW EKQTAALLQA DYRVITYDRR 
GFGQSSQPTV GYDYDTFAAD LNTVLETLDL TDVVLVGFSM GTGEVARYLS RYGSARVAKA
AFLASLEPFL LQTDDNPTGV PQDVFDGILA AVTADRYAYF TDFYRNFYNT DDTLGSRLSE
EALRNSWNVA AGASWYASSA AVPTWITDFR ADIPAVDVPT LILHGTADNI LPIDATAREF
HKRLPEADYV EIDGAPHGLL WTHTTEVNQA LLTFLAK