Gene Strop_3952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3952 
Symbol 
ID5060433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4508024 
End bp4508566 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content65% 
IMG OID640476212 
Producthypothetical protein 
Protein accessionYP_001160760 
Protein GI145596463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.99956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGC TACCCGACCC AACAGCGCAG CTAGGCGATG AGGACCGCGC CGCATACGAC 
CGGATGGCTG CCACCCGGGC CCACTCCGAT GGCAGAGCGA GACTCGGGAA TGTCTACGTG
CGAATGTTCA ACAATCCCGG GGTCGCCATC AAGGTCGGCG CACTCGGCGA ACACCTGAGG
TTCCACGCGA CCCTCCCCGA CGACGTGCGT GAACTCACCA TCCTCCGGTT CTCAGAACGG
CGCGGCTACT CCTACGAGTT GGCCCACCAC CACCGGTCTG CCCGGCTCGC TGGCATCAGC
TCGGCCACAA TCAACCAGCT CAGCTCCGGC ACCATCCCTG ACGATCTTCC CGATCCGCAA
CGGGCGGCGC TGGAAGTGGT CGATGCCGTC GCCGCCGCAC GGTCAATCCC GGAGAACGTG
CAGCACCGAC TGACAGCCGC CTACGGCACC GCCGGCGTCG TGGAGGTGGT GGCCCTGTGC
GGGCTGTACT CATTGATGGG ATACATGGTC ACAGCCTTCG ACATTCCGCT CGAGCACACC
TGA
 
Protein sequence
MATLPDPTAQ LGDEDRAAYD RMAATRAHSD GRARLGNVYV RMFNNPGVAI KVGALGEHLR 
FHATLPDDVR ELTILRFSER RGYSYELAHH HRSARLAGIS SATINQLSSG TIPDDLPDPQ
RAALEVVDAV AAARSIPENV QHRLTAAYGT AGVVEVVALC GLYSLMGYMV TAFDIPLEHT