| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3950 |
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| Symbol | |
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| ID | 5060431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4504440 |
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| End bp | 4506185 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640476210 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001160758 |
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| Protein GI | 145596461 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.626862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGTCC CGTGGCCCCA CGCCCGGTAC GACGACCGGC ATCCGAAGAT CAAGAGAGGC
ACTCACGTGA GTGGTGGACC GCTGATCGTA CAGTCGGACA AGACCCTGCT GTTGGAGATC
GAGCACCCCG ACGCGCAGGC ATGCCGGTTG GCGATCGCGC CGTTCGCCGA GTTGGAACGC
TCACCGGAGC ATGTGCACAC CTACCGGCTG ACTCCGCTGG GGTTGTGGAA CGCCCGGGCC
GCCGGTCACG ACGCCGAGGG CGTGGTCAAC GCGCTGATCA CATACAGCCG CTATCCGGTG
CCGCACGCCC TGCTGGTTGA CGTGGCCGAG ACGATGGATC GGTACGGCCG GTTGCGACTG
ATCAATGACC CGGCGCACGG CCTGGTGCTG CGGGCCGTGG ACCGGGTGGT GTTGGTCGAG
GTCGCCAAGA GCAAGAAGCT CGCCGGGATG CTCGGCACGA AGCTCGACGA CGACACCATC
ACGGTGCATC CGTCCGAGCG CGGGCGACTC AAGCAGGCAC TGCTCAAACT CGGCTGGCCG
GCCGAGGACC TGGCCGGGTA CGTCAACGGT GAGGCGCACC CGATCGAGCT GGCCGAGGCC
GGCGCGGACG GCCGGAAGCC GTGGACCCTG CGCTCCTACC AGCGGGAGGC GGTGGAGGCG
TTCTGGGCCG GCGGGTCGGG CGTGGTGGTG CTGCCCTGCG GCGCGGGGAA GACCCTGGTC
GGGGCGGCGG CGATGGCCGA GGCGAAGGCG ACCACGCTGA TCCTGGTAAC GAACACCGTG
GCGGGGCGGC AGTGGAAACG GGAGTTGGTG GCCCGCACGT CCCTGACCGA GGAGGAGATC
GGCGAGTACT CGGGGGAGCG CAAGGAGATT CGTCCGGTCA CCATCGCCAC GTACCAGGTG
TTGACGTCAC GACGCGGCGG CGCGTTCACC CACCTGGACC TGTTCGGAGC GCGCGACTGG
GGTCTGGTCG TCTATGACGA GGTCCACCTG TTGCCGGCAC CGATCTTCCG GTTCACCGCC
GACCTTCAGG CCCGTCGCCG GCTGGGGCTG ACCGCCACCC TGGTTCGCGA GGACGGCCGG
GAGGGGGACG TGTTCAGCCT GATCGGTCCG AAGCGGTACG ACGCGCCGTG GAAGGACATC
GAACAGCAGG GTTGGATCGC CCCGGCCCGG TGCACCGAGG TACGGGTGAC GCTCACCGAG
GCCGAGCGGA TGGCGTACGC GACGGCGGAG GCCGAGGAGC GCTACCGGAT GGCCGCGACC
ACCCGTACCA AGCTGCCGGT GGTGAAGGCG CTGCTCGACC GGCATCCGGA CGAGCAGACC
CTGGTGATTG GTGGGTACAT CGACCAGCTG CACCAGCTGG GGGAATATCT GGACGCGCCG
ATCGTGCAGG GGGCGACGAC GAACCGGGAA CGGGAGCGGC TGTTCGACGC GTTCCGCTCC
GGTGAGCTGC GGACCCTGGT GATCTCGAAG GTGGGGAACT TCTCGATCGA TCTGCCGGAG
GCGGCGGTGG CGGTCCAGGT GTCGGGCACG TTCGGCTCCC GGCAGGAGGA GGCGCAGCGG
CTCGGTCGGG TGCTCCGGCC CAAGGCCGAC GGCCGGCAGG CGCACTTCTA CACGGTGGTG
TCCCGGGACA CGATCGACAC CGAGTACGCC GCCCACCGGC AACGCTTCCT CGCCGAGCAG
GGGTACGCCT ACACGATCGT GGACGCCGAC GACGTCCTCG GCCCGTCACT GCCCTCGGTC
GACTGA
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| Protein sequence | MVVPWPHARY DDRHPKIKRG THVSGGPLIV QSDKTLLLEI EHPDAQACRL AIAPFAELER
SPEHVHTYRL TPLGLWNARA AGHDAEGVVN ALITYSRYPV PHALLVDVAE TMDRYGRLRL
INDPAHGLVL RAVDRVVLVE VAKSKKLAGM LGTKLDDDTI TVHPSERGRL KQALLKLGWP
AEDLAGYVNG EAHPIELAEA GADGRKPWTL RSYQREAVEA FWAGGSGVVV LPCGAGKTLV
GAAAMAEAKA TTLILVTNTV AGRQWKRELV ARTSLTEEEI GEYSGERKEI RPVTIATYQV
LTSRRGGAFT HLDLFGARDW GLVVYDEVHL LPAPIFRFTA DLQARRRLGL TATLVREDGR
EGDVFSLIGP KRYDAPWKDI EQQGWIAPAR CTEVRVTLTE AERMAYATAE AEERYRMAAT
TRTKLPVVKA LLDRHPDEQT LVIGGYIDQL HQLGEYLDAP IVQGATTNRE RERLFDAFRS
GELRTLVISK VGNFSIDLPE AAVAVQVSGT FGSRQEEAQR LGRVLRPKAD GRQAHFYTVV
SRDTIDTEYA AHRQRFLAEQ GYAYTIVDAD DVLGPSLPSV D
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