Gene Strop_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3938 
Symbol 
ID5060416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4492011 
End bp4492739 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content65% 
IMG OID640476195 
Producttranscription termination/antitermination factor NusG 
Protein accessionYP_001160746 
Protein GI145596449 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGAGT ACGACGAGAC CGCCGAGCCC GTGGACGAGC AGTCCACGGT TGCGACCGCG 
GCTGGTGACA TGTCGGTTGA GGCCGCCAGC GAGCCGGAGC TCTCCGACAG CGCCAGCGAG
CCGGCCGAGG AGCCCGAGTT CGACCCGGTT GCCGAGCTGC GCCAGAAGCT GCGCTACGCC
CCGGGCGACT GGTATGTGGT GCACTCGTAC GCCGGCTACG AGAACAAGGT CAAGACCAAC
CTCGAGACCC GGATCACCTC CCTCGACATG GAGGACTACA TCTACCAGGT CGAGGTGCCG
ACCCGGGACG AGGTCGAGGT CAAGAACGGC AAGCGTTCCC AGGTTCAGGC CAAGGTCTTC
CCCGGCTACA TCCTGGTTCG AATGGAGCTC ACCGCCGAGT CGTACTCCTG CGTGCGGAAC
ACGCCAGGCG TGACCGGCTT CGTGGGCGCC ACCGACCGGG CCGACCGTCC TGCGCCGCTC
AGCCTTGACG AGGTGTTGAA GTGGCTGGCG CCAGCAGTCG AGGCGGTGGA GAAGAAGGCG
AAGCCCGAGG TCAAGGTCCT CGACTTTGAG GTTGGCGACT CGGTTACCGT CACCGACGGC
GCCTTCGCCT CGCTGCCGGC GACGATCAGC GAGATCAATG CTGACCAGCA GAAGCTCAAG
GTGCTGGTGT CGATCTTCGG TCGAGAGACA CCGGTGGAGC TGAACTTCAA CCAGGTCGCC
AAGATCTGA
 
Protein sequence
MPEYDETAEP VDEQSTVATA AGDMSVEAAS EPELSDSASE PAEEPEFDPV AELRQKLRYA 
PGDWYVVHSY AGYENKVKTN LETRITSLDM EDYIYQVEVP TRDEVEVKNG KRSQVQAKVF
PGYILVRMEL TAESYSCVRN TPGVTGFVGA TDRADRPAPL SLDEVLKWLA PAVEAVEKKA
KPEVKVLDFE VGDSVTVTDG AFASLPATIS EINADQQKLK VLVSIFGRET PVELNFNQVA
KI