Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3924 |
Symbol | rpsJ |
ID | 5060402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4474076 |
End bp | 4474384 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640476181 |
Product | 30S ribosomal protein S10 |
Protein accession | YP_001160732 |
Protein GI | 145596435 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0051] Ribosomal protein S10 |
TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGAC AGAAGATCCG CATCCGGCTC AAGGCCTATG ACCACGAGGT CGTCGACTCC TCGGCTCGGA AGATCGTCGA GACGGTGACG CGCACCGGGG CGCAGGTCGC AGGCCCGGTG CCGCTGCCCA CGGAGATCAA CCGTTTCTGC GTTATCCGCT CGCCGCACAA GTACAAGGAC TCGCGCGAGC ACTTCGAGAT GCGCACGCAC AAGCGGCTGA TCGACATCAT CGACCCGACC CCGAAGACGG TCGACTCGCT CATGCGCCTC GACCTGCCGG CTGGCGTCGA CATCGAGATC AAGCTGTAG
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Protein sequence | MAGQKIRIRL KAYDHEVVDS SARKIVETVT RTGAQVAGPV PLPTEINRFC VIRSPHKYKD SREHFEMRTH KRLIDIIDPT PKTVDSLMRL DLPAGVDIEI KL
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