| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3903 |
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| Symbol | secY |
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| ID | 5060381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4462528 |
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| End bp | 4463853 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640476160 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001160711 |
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| Protein GI | 145596414 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.340332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGTCTG CCTTTCTCAG TGCGTTCCGT ACGCCTGACC TGCGCAAGAA GCTGCTGTTC
ACGATCGGGA TCATCGCGAT CTACCGCCTC GGCGCTGCGC TGCCCAGTCC CGGCGTGTCG
TATACCAACG TGCAGAAGTG TATCGATGCG ACGCAGGGCA GCACCGGCGT ACTGAACCTG
CTCAACCTCT TCTCCGGTGG AGCGTTGCTG CAGCTCTCGG TCTTCGCGCT GGGCATCATG
CCCTACATCA CCGCGTCGAT CATCCTGCAG CTGTTGACTG TGGTCATCCC CCGGCTGGAG
CAGCTCCGCA AGGAGGGCCA GGCCGGCCAA GCGAAGATTA CGCAGTACAC CCGCTACCTG
ACCCTTGGGC TCGGTGTCCT ACAGGCGTCG GCCTTCGTGG CGTTGGCCCG CTCCGGGCAG
CTCTTTAACA ACCAGTGCGA CCAGTTCCCG ATCATCCCGG AAGGGACCGG TATCCCGGAC
TGGCTGACCC TGAGCATCCT GGTCATGACG ATGACCGCCG GAACCGGTGT GGTGATGTGG
CTCGGCGAGC TGATCACCGA CCGGGGCGTC GGTAACGGCA TGTCCGTGCT GATCTTCACC
TCGATCGCGG CTCGGCTCCC CGCCGAAGGC TGGACGATCA AGGAGAGCCA GGGCTGGGCC
AAGTTCCTGC TCGTCATCGC CCTGGTGCTG GTCATCATCA CTGCGGTCAC CTTCATCGAG
CAGTCGCAGC GCCGGATCCC GGTGCAGTAC GCCAAGCGGA TGATCGGTCG GCGGATGTAC
GGCGGCACGT CCACCTACAT CCCGCTGAAG GTGAACCAGG CCGGTGTCAT TCCGGTCATC
TTCGGCTCGT CGTTGCTCTA CCTGCCGCAG CTGGCCTTGC AGTTCTTCGA CCAGACCGAC
CCGGGCCGGA CCCAGGTGTG GATCCAGAAC AACCTGGTCG ATCCGACCAG CCCGATCTAC
ATCGTGGTCT ACTTCCTGCT GATCATCTTC TTCACGTACT TCTACGTCTC GATCACCTTC
AACCCGACCG AGGTAGCGGA CAACATGAAG AAGTACGGCG GCTTCGTCCC GGGCATCCGT
CCGGGCAAGC CGACCGCCGA CTACCTCGAC TTCATCCTTA GTCGGATCAC CCTGCCCGGC
GCGCTCTACC TGGCCGTCGT CTCGATCCTG CCGAACTTCT TCTTCATCTG GCTCGACCGC
CAGCAGTACC TGAACTTCCC GTTCGGTGGT ACCGCCGTGC TGATTATGGT TGGTGTCGGT
CTTGAGACCA CCAAGCAGAT CGAGAGCCAA CTGATGCAGC GGAACTACGA AGGGTTCCTG
CGGTAG
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| Protein sequence | MLSAFLSAFR TPDLRKKLLF TIGIIAIYRL GAALPSPGVS YTNVQKCIDA TQGSTGVLNL
LNLFSGGALL QLSVFALGIM PYITASIILQ LLTVVIPRLE QLRKEGQAGQ AKITQYTRYL
TLGLGVLQAS AFVALARSGQ LFNNQCDQFP IIPEGTGIPD WLTLSILVMT MTAGTGVVMW
LGELITDRGV GNGMSVLIFT SIAARLPAEG WTIKESQGWA KFLLVIALVL VIITAVTFIE
QSQRRIPVQY AKRMIGRRMY GGTSTYIPLK VNQAGVIPVI FGSSLLYLPQ LALQFFDQTD
PGRTQVWIQN NLVDPTSPIY IVVYFLLIIF FTYFYVSITF NPTEVADNMK KYGGFVPGIR
PGKPTADYLD FILSRITLPG ALYLAVVSIL PNFFFIWLDR QQYLNFPFGG TAVLIMVGVG
LETTKQIESQ LMQRNYEGFL R
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