| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3895 |
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| Symbol | |
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| ID | 5060373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4457180 |
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| End bp | 4458244 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640476152 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001160703 |
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| Protein GI | 145596406 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGTCA TATGGCGGGC GCCCCGGAAG AAAAGAGAAG AGATGCTCAT CTCCCAGCGA
CCCTCGCTCT CCGAGGAGTC GATCAACGAG ACCCGGTCCC GGTTCACCAT CGAGCCGCTG
GAGCCCGGCT TCGGCTACAC CCTGGGTAAC TCGCTGCGCC GGACGCTGCT GTCGTCCATT
CCCGGCGCGG CGGTGACCTC GATCAAGATC GATGGTGTGC TGCACGAGTT CACCACGATC
CCCGGGGTCA AGGAGGATGT GGTCGAGCTC GTCATGAACA TCAAGGAGCT CTGCGTCAGC
TCCGAGCACG ACGAGCCGGT CAGCATGTAC CTGCGCAAGC AGGGCCCGGG TGACGTGACC
GCGGGTGACA TCCAGCCCCC GGCTGGCGTC TCGGTGCACA ACCCGGACCT GAAGCTCGCC
ACCCTCAACG GCAAGGGCCG GCTCGACATG GAGCTGACCG TCGAGCGGGG CCGTGGCTAC
GTCACCGCGG CGCAGAACAA GCAGGCGGGT GCCGAGATCG GTCGGATCCC GGTCGACTCG
ATCTACTCGC CGGTGCTCCG GGTGACCTAC CGGGTCGAGG CGACCCGGGT CGAGCAGCGG
ACCGACTTCG ATCGGCTGAT CATTGACGTC GAGTCCAAGC CGTCGATGGG GCCCCGTACG
GCCCTGGCCT CGGCCGGTTC CACGCTGGTC GAGCTCTTTG GCCTGGCCCG GGAGCTGGAC
GAGACCGCAG AGGGCATCGA CATCGGGCCG TCCCCGCAGG ACGCCCAGCT GGCAGCGGAT
CTGGCGCTGC CGATCGAGGA GCTGGACCTC ACCGTCCGCT CCTACAACTG CCTCAAGCGC
GAGGGCATCA ACACCGTTGG TGAGCTCATT GGGCGTACCG AGGCTGACCT CCTCGACATC
CGTAACTTCG GCCAGAAGTC GATCGACGAG GTCAAGATGA AGCTCGCTGG GATGGGCTTG
GGGCTGAAGG ACTCGGCCCC GAACTTCGAC CCGGCGAACG TCGTGGACGC CTTCGGCGAG
GCCGACTACG ACACCGAGGA CTACCGCGAG ACTGAGCAGC TGTAA
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| Protein sequence | MGVIWRAPRK KREEMLISQR PSLSEESINE TRSRFTIEPL EPGFGYTLGN SLRRTLLSSI
PGAAVTSIKI DGVLHEFTTI PGVKEDVVEL VMNIKELCVS SEHDEPVSMY LRKQGPGDVT
AGDIQPPAGV SVHNPDLKLA TLNGKGRLDM ELTVERGRGY VTAAQNKQAG AEIGRIPVDS
IYSPVLRVTY RVEATRVEQR TDFDRLIIDV ESKPSMGPRT ALASAGSTLV ELFGLARELD
ETAEGIDIGP SPQDAQLAAD LALPIEELDL TVRSYNCLKR EGINTVGELI GRTEADLLDI
RNFGQKSIDE VKMKLAGMGL GLKDSAPNFD PANVVDAFGE ADYDTEDYRE TEQL
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