Gene Strop_3868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3868 
Symbol 
ID5060346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4428915 
End bp4430351 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content73% 
IMG OID640476125 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001160676 
Protein GI145596379 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGATC GAATCGTGAT CATCGGCAAC GGAATGGCCG GTACCCGCCT CGCCAGTGAG 
CTCGCCGCGC ACGGCGGGGA CCGGAAGGTC ACGGTGCTCG GGGCGGAACC GTACCGGGCC
TACAACCGGA TCATGCTCTC CACCCTGCTG GCCGGAGCAG CCGAGGAGCC GGACGTGCAG
CTGGCCGAGG TTGCCGGGCA CGGAGTCGAC CTGCGTACCG GGGTCACCGC CATCACGATC
GACCGAAGGG ACCGTACGGT CGGTACCGAC CGGGGCGACC GGATCCACTA CGACCACCTG
GTCTTGGCCA CCGGCAGCCA CGCCGTTGTC CCCCCACTGA CCGGGCTGGC CGGCTGGGAA
CTGCCGGAAC GGGTGGTGCC ATTTCGGACC CTGGATGACT GCCGCCGCAT CCTCGCCGTC
GCTGACCGGG CCCGCCGCGT GCTGGTGCTC GGCGGCGGGC TACTCGGCCT GGAAGCGGCC
CGCGGGCTCG CCGGCCGCGG GCTCGAGGTG ACGGTGGTGC ACCCGGTGCC GTACCTGATG
GAGCGGCAGC TCGACCCAGC CGCGGCGGCC GTGCTCGCCC GCACCCTCGC CGGCCTCGGG
GTCACCACCC AGCTGGCCGT ACCGGCCACC GCCGTGGTCG CCGACCCCCG CGGCGTCCGC
CTCGAGCTGG CCGACGGCCG GTCGCTCGAC GCCGACCTGT TGGTGCTTGC CTGCGGCGTG
CGCCCGGAGA CCGCGCTCGC CACGGCCGCC GACCTGACCG TACGGCGGGG GGTTCTGGTC
GACGACCAGC TACGCACCAA CGACCGACAC ATCTCGGCCA TCGGCGACTG CGCCCAGCAC
GGCGACACCC TGACCGGTCT GGTGGCCCCG GCCTGGGCAC AGGCACGGGT GCTGGCCCAG
GTGCTCAGCG GCGCGGACCC GGCGGCCCGA TACCGGCCAA GGCCGGTGGT GACCCGCCTC
AAGACCGCCG GCATCGATCT GGCAGCTATG GGTGACCCCG GCGACGGTCC CGGCGAGGAG
CTGACCTTCA CCGACGTGGC CGGTGGCACG TACGCCCGGC TGCGCATCAA CCACGAGCGG
GTGACCGCCG CGATCCTGCT GGGCGACAAC CCGTCCGTGG GCACGGTCAT CCAGCTCTTC
GACCGGGGGC AGCCGGTGCC CAGCGACCGG CGGTCGCTGC TGCTCGGCCG GGCGCTCGGC
ACCGGGCCGG CGGAACCCGC CACGACACCG GCGCTGATGC CGGACGGGGC GACCGTCTGC
CACTGCAACA ACGTCAACAA GCGGACACTG GTGGAGAGTT GGCGCCGCGG GGCGCGGACG
GTCGACGAGG TGGTGGCGGC GACCCACGCC GGTACGGGCT GCGGCTCCTG CCGGGACGCG
GTCGCCGGCA TCGCCGAATG GCTCTCCACC GTGGAATCGG TGGAGGTGGG GCGATGA
 
Protein sequence
MTDRIVIIGN GMAGTRLASE LAAHGGDRKV TVLGAEPYRA YNRIMLSTLL AGAAEEPDVQ 
LAEVAGHGVD LRTGVTAITI DRRDRTVGTD RGDRIHYDHL VLATGSHAVV PPLTGLAGWE
LPERVVPFRT LDDCRRILAV ADRARRVLVL GGGLLGLEAA RGLAGRGLEV TVVHPVPYLM
ERQLDPAAAA VLARTLAGLG VTTQLAVPAT AVVADPRGVR LELADGRSLD ADLLVLACGV
RPETALATAA DLTVRRGVLV DDQLRTNDRH ISAIGDCAQH GDTLTGLVAP AWAQARVLAQ
VLSGADPAAR YRPRPVVTRL KTAGIDLAAM GDPGDGPGEE LTFTDVAGGT YARLRINHER
VTAAILLGDN PSVGTVIQLF DRGQPVPSDR RSLLLGRALG TGPAEPATTP ALMPDGATVC
HCNNVNKRTL VESWRRGART VDEVVAATHA GTGCGSCRDA VAGIAEWLST VESVEVGR