Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3857 |
Symbol | |
ID | 5060335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4415340 |
End bp | 4416458 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640476114 |
Product | alanine racemase |
Protein accession | YP_001160665 |
Protein GI | 145596368 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.859951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.532248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCAGG CCGAGGTACG CGTCGACCTT GACGCGATCC GTGAGAACGT GAGTTGGTTG CGCTCCGGTA GCGCCGCCGA GTTGATGGCG GTGGTCAAGG GGGACGGGTA CGGCCACGGC ATGGTCCCGG CCGCCCACGC CGCGCTGGAT GGTGGCGCCG ACTGGCTCGG TGTCTGCACC CTCGATGAGG CGCTCACCCT GCGCCGGGCA GGGATCACCG TGCCGGTTCT GGCCTGGCTG CTCGCGCCGG GCCTGCCGTT ACACGAAGGC GTGACGGCCG GGATTGACCT CGGCGTAGCC AGCGTGGCGC AGCTCGAGGA GATGGTCGAG GCGGGCCGGG TGGCCGGGCG TCCGGCCCGA CTGCACCTCA AGATCGACAC AGGGCTGTCC CGAGGTGGCG CGACCATCTC GGAGTGGCCG GAGCTGCTCG ACGCCGCGGC GAAGGCGCAG GCGGACGGCG CGGTCGAGGT GGTGGGGGTG TGGAGCCACT TCGTGTACGC GGACGCACCC GGACACCCGA CCACCGACCG GCAGCTCGCC GTCTTCCACG AGGGGCTGGG CATGGTGGAG AAGGCGGGAC TGCGCCCGCG CTACCGCCAC CTGGCCAACT CGGCGGCCAC GCTGACCCGG CCGGACGCCC ACTTCGACCT GGTCCGTCCC GGGCTGGCCG TCTACGGGCT CTCTCCGGTG GCCGGGGAGC GCTTCGGCCT GCGGCCGGCG ATGACCGCCC GGGCCCGTGT CATGCTCACC AAGCAGGTCC CGGCCGGAGC CGGGGTCTCC TACGGCCACA CGTACACCAC CGATCGGGCG AGCAACCTCG CGGTGATTCC ACTCGGGTAC GCCGACGGGG TCCCCCGGGA CGCGTCCAAC AGCGGCCCGG TGCAGCTCGG TGGCGTCCGG CGGACCATCT CCGGCCGGGT CTGCATGGAC CAGTTCGTGC TCGACTGCGG CGACGATCCG GTCGCGCCGG GAGACGTGGC CACCCTCTTC GGCACCGGGA GGGACGGTGA GCCCACCGCC GACGACTGGG CCGAGGCGGT CGGCACGATC AACTATGAGA TCGTCACCCG ATTCGGCAGC ACCCGGGTGC CCCGCTGCTA CGACGGCGAG CGTCCGTGA
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Protein sequence | MWQAEVRVDL DAIRENVSWL RSGSAAELMA VVKGDGYGHG MVPAAHAALD GGADWLGVCT LDEALTLRRA GITVPVLAWL LAPGLPLHEG VTAGIDLGVA SVAQLEEMVE AGRVAGRPAR LHLKIDTGLS RGGATISEWP ELLDAAAKAQ ADGAVEVVGV WSHFVYADAP GHPTTDRQLA VFHEGLGMVE KAGLRPRYRH LANSAATLTR PDAHFDLVRP GLAVYGLSPV AGERFGLRPA MTARARVMLT KQVPAGAGVS YGHTYTTDRA SNLAVIPLGY ADGVPRDASN SGPVQLGGVR RTISGRVCMD QFVLDCGDDP VAPGDVATLF GTGRDGEPTA DDWAEAVGTI NYEIVTRFGS TRVPRCYDGE RP
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