Gene Strop_3842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3842 
Symbol 
ID5060320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4403009 
End bp4403317 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content66% 
IMG OID640476099 
Productchaperonin Cpn10 
Protein accessionYP_001160650 
Protein GI145596353 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTACCG CGACCAAGGT TGCGATCAAG CCGCTTGAGG ACCGCATCGT GGTCCAGGCG 
AATGAGGCTG AGACCACCAC GGCGTCGGGC ATCGTGATTC CCGACACCGC CAAGGAGAAG
CCGCAGGAGG GCACTGTCCT CGCTGTCGGC CCGGGCCGGA TCGACGACAA GGGCAACCGC
GTGCCGATCG ACGTCAAGGT CGGCGACACC GTCCTCTACT CGAAGTACGG CGGCACCGAG
GTCAAGTACG CCGGCGAGGA GTACCTGGTG CTCTCCGCCC GCGACGTCCT CGCGGTCATC
GAGAAGTAG
 
Protein sequence
MTTATKVAIK PLEDRIVVQA NEAETTTASG IVIPDTAKEK PQEGTVLAVG PGRIDDKGNR 
VPIDVKVGDT VLYSKYGGTE VKYAGEEYLV LSARDVLAVI EK