| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3834 |
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| Symbol | |
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| ID | 5060312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4391977 |
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| End bp | 4393668 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640476091 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001160642 |
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| Protein GI | 145596345 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.551048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTACG ACGTGGTTGT CATCGGGTCC GGCTTCGGCG GTGGCGTCGC CGCGTTGCGG
CTGGCCGAGA AGGGCTACCG GGTCGGGGTG CTGGAGGCGG GCCGGCGCTT CGCCGATGGC
GACTTCCCAC GGACGTCCTG GCAGCTGCGT CGCTTCGTCT GGGCGCCGTT CCTGGGCTGC
TACGGCCTAC AGCGGATCAC GCTGCTGCGG GCGGGTCAGC GTCGGGCGGG TGGCGTGCTG
GTGCTCTCCG GGGCTGGAGT GGGCGGCGGC TCCCTGGTCT ACGCGAACAC CCTGTACGAG
CCGCTGGACG CCTTCTTCGA GGACCCGCAG TGGCGGGACA TCACCGACTG GCGGGAGGAG
TTGACCCGCC ACTTCGATCA GGCGAAGCGA ATGCTCGGCG TCACCACGTA CCCGGAGACC
ACCGGGTCGG ACCGGGCGAT GCGATCGGTG GCGGAGCGGA TGGGGGTCGG GCACACCTTC
CGGGCCACCC CGGTCGGGGT GTACCTCGGC CGGCCGGGTC AGCGCGTGCC CGATCCGTAC
TTTGGCGGGG CGGGGCCGGA GCGTACCGGC TGCACGCACT GTGGCGCCTG CATGACGGGG
TGTCGGCTCG GCGCGAAGAA CACGCTGGCC AAGAACTACC TGTGGCTGGC CGAGCGGCTC
GGTGCGCGGG TGCATCCGTT GACGACCGTG ACCGCCGTCG TGCCGGTCGA GGGGGGCGGG
TACGCGGTGC ACACCCGGCG TACCGGCTCC TGGCTGCGGG GGCGCTCGCA GGTGATCCAC
GCCGACCAGG TGGTCTTTGC CGCCGGCGCG TTGGGTACCC AGCGCCTGCT GCACGGGATG
AAGGTGGCTG GCACTCTGCC ACGGCTCTCG TCCCGCCTTG GAGTGTTGAC CCGAACCAAC
TCGGAGGCGA TCCTCGGTGC CTCGGTGCCC CGGAGGACGG CGCGGGCGGC CGGGGTCGAC
TTCACCGAAG GGGTGGCGAT CACGAGTTCG TTCCACCCCG ATCCGCAGAC CCACATCGAA
CCGGTCCGCT ATGGCCGGGG CTCGAACGCG ATGGGACTGC TCCAGTCTCT GTTGGTGGAC
GGCGGCCCGC GTCGGGTACG TCGCTGGCTG GGCAATCTCG TGCGGCAGCC ACGTGCTGCG
GCGGGGATGC TGTCGGTCCG CAACTGGTCC GAGCGCACGG TGATCGCCCT GGTCATGCAG
TCGGCGGACA ATTCGTTGAC CACCCGGCTA CGTCGCGGGC TCGGCGGTCG TCGACTCGTC
TGCGAACCGG GTCACGGAGA GCCGAACCCG ACCTGGATAC CGGCCGGCAA CCGGGCGGTT
CGGCTTCTGG CCGAGGAGAT CAACGGGGTG CCGGGTGGTT CGCTCACCGA ACCGTTCAAC
GTCCCGGTGA CCGCGCACTT CCTGGGCGGC GCGGTGATCG GCGCCACCGA GGACGACGGC
GTGGTGGACC CGTGGCAACG GGTGTACGGC CACCCCGGGC TGCACGTCGT CGACGGCGCG
GCGGTCTCGG CCAATCTCGG GGTGAATCCG AGCCTGACCA TCACCGCCCA GGCCGAGCGG
GCCCTGTCGT TCTGGCCGAA CAAGGGGGAC CCGGATCCCC GCCCTCCGCT CGGCTCCCGG
TACGTCCGGC TGCCCCCGGT GGCCCCACGT CATCCGGCGG TGCCAGCTGA CGCCCCCGGT
GCGCTGCGGT AG
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| Protein sequence | MRYDVVVIGS GFGGGVAALR LAEKGYRVGV LEAGRRFADG DFPRTSWQLR RFVWAPFLGC
YGLQRITLLR AGQRRAGGVL VLSGAGVGGG SLVYANTLYE PLDAFFEDPQ WRDITDWREE
LTRHFDQAKR MLGVTTYPET TGSDRAMRSV AERMGVGHTF RATPVGVYLG RPGQRVPDPY
FGGAGPERTG CTHCGACMTG CRLGAKNTLA KNYLWLAERL GARVHPLTTV TAVVPVEGGG
YAVHTRRTGS WLRGRSQVIH ADQVVFAAGA LGTQRLLHGM KVAGTLPRLS SRLGVLTRTN
SEAILGASVP RRTARAAGVD FTEGVAITSS FHPDPQTHIE PVRYGRGSNA MGLLQSLLVD
GGPRRVRRWL GNLVRQPRAA AGMLSVRNWS ERTVIALVMQ SADNSLTTRL RRGLGGRRLV
CEPGHGEPNP TWIPAGNRAV RLLAEEINGV PGGSLTEPFN VPVTAHFLGG AVIGATEDDG
VVDPWQRVYG HPGLHVVDGA AVSANLGVNP SLTITAQAER ALSFWPNKGD PDPRPPLGSR
YVRLPPVAPR HPAVPADAPG ALR
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