| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3803 |
|---|
| Symbol | |
|---|
| ID | 5060281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4358665 |
|---|
| End bp | 4359423 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640476061 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001160612 |
|---|
| Protein GI | 145596315 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCTGC TCTCGCACGA CATGGTGGGG ACCGGTGACA CGGTCGTCCT GCTGCATTCG
TCGGTGTGTG ACCGGCGGAT GTGGGACCCG CAGTGGCAGT CGCTGCTGGA CGCCGGGTAC
CGCGTGGTGC GCTGTGACTT CCGGGGTTAT GGGCAGACAC CGGTGCCGGA CGCGCCGAAC
AACAATGCGG ACGATGTACG TGAACTGCTG GACGCACTGG GCATCGAGCA GACGGCCGTC
GTCGGCTCCT CCTACGGCGG CCGGGTAGCC CTGGAGTTCG CGGCCCGCTG GCCGAACCGG
GTGAGCGCTC TGGCGCTGCT CTGCGCCGGC TCACCCCACC ATGAGCCCAC CGCGGAGCTG
GACACCTTCG ACGCTGAAGA GGAGGCTCTG GTCGACGCCG ACGACCTGGA CGGCGCAGTC
GAGCTCAACG TACGTACCTG GCTGGGACCG GACGCCGACG ACGAGACGCG CGAGAGGGTA
CGGGGCATGC AGCGGCACGC CTATGACGTA CAGCTCGCCG CGGAGGGGGA GTACGACCAA
CTGGAGGCGG ACTGCGAGCT GTCGACGATC ACGGCCCGCA CCCTGATCGT CTCGGGCAAG
CACGACCTGG ACTACTTCCA GCAGGTCGCC ATCGACCTGG CCGACCGCCT CTCCGACGCC
CGGCACGTAC AACTGCCGTG GGGCGGGCAC CTCCCGAGCC TTGAGCGCCC CGCCGAGACC
GCGACGCTCC TCAAGGACTT CCTGAACGCG TCCTCCTGA
|
|---|
| Protein sequence | MVLLSHDMVG TGDTVVLLHS SVCDRRMWDP QWQSLLDAGY RVVRCDFRGY GQTPVPDAPN
NNADDVRELL DALGIEQTAV VGSSYGGRVA LEFAARWPNR VSALALLCAG SPHHEPTAEL
DTFDAEEEAL VDADDLDGAV ELNVRTWLGP DADDETRERV RGMQRHAYDV QLAAEGEYDQ
LEADCELSTI TARTLIVSGK HDLDYFQQVA IDLADRLSDA RHVQLPWGGH LPSLERPAET
ATLLKDFLNA SS
|
|---|
| |