Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3717 |
Symbol | |
ID | 5060193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4260115 |
End bp | 4260843 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640475973 |
Product | hypothetical protein |
Protein accession | YP_001160526 |
Protein GI | 145596229 |
COG category | [S] Function unknown |
COG ID | [COG2135] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGGTG TGTGCGGGAG ATACGCGACG ACCCGGTCCG CGGGGGACCT GAGTGCGATG TTCGAGTCGT ACGACGAAAC GGGTGGTCGG CTCGGCGCAG ACTACAACGT CGCTCCCACC GATCCGGTGC CGTTGGTTCA GGCCACCGCG GCGGGCCAGC GGGTGCTGTC GCTGGGGCGT TGGGGCTTTG TCCCGGCGTG GTCGCGGTCC CTGGCCGGCG CTGCTCGCAT GATCAATGCT CGGGCCGAGA CGGTGGCCAC GAGCCGGGCG TACGCTCGTG CCTTCGCCCG CCACCGCTGT CTGCTGCCGG CGGACGGCTG GTACGAGTGG GTTCGCCACC CGGGTGGTAA GCAGGCGTAC TACCTGACTC CTCGGGATGG CTCGGCGGTC GTCTTCGGCG GCATCTGGTC GGTGTGGGAG GGCCCGGGCG GTCCGTTGCT CACCTGCGGC ATCGTGACCA CCCCCGCCCG TGGTGACCTG GCCGACGTGC ACGACCGGAT GCCGCTGTTG TTGCCCCGTG AGCGCTGGGG TGCCTGGCTG GCGTCCACGG ACAGCCCGGT CGACCTGCTC GCGCCGCCGT CGCTGGAGTG GCTGGCCGGG CTGGAGATTC GTCCGGTTGG GCCGGCGGTT GGCAATGTTC GTAATGACGG TCCGAGCCTC GTGGAACGGG TCACCGCGGC GGTGCCACGC CGGCGTGGTA GCGGGCCCGG GGAGGAGACG CTCTTCTGA
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Protein sequence | MSGVCGRYAT TRSAGDLSAM FESYDETGGR LGADYNVAPT DPVPLVQATA AGQRVLSLGR WGFVPAWSRS LAGAARMINA RAETVATSRA YARAFARHRC LLPADGWYEW VRHPGGKQAY YLTPRDGSAV VFGGIWSVWE GPGGPLLTCG IVTTPARGDL ADVHDRMPLL LPRERWGAWL ASTDSPVDLL APPSLEWLAG LEIRPVGPAV GNVRNDGPSL VERVTAAVPR RRGSGPGEET LF
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