Gene Strop_3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3717 
Symbol 
ID5060193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4260115 
End bp4260843 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content71% 
IMG OID640475973 
Producthypothetical protein 
Protein accessionYP_001160526 
Protein GI145596229 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGGTG TGTGCGGGAG ATACGCGACG ACCCGGTCCG CGGGGGACCT GAGTGCGATG 
TTCGAGTCGT ACGACGAAAC GGGTGGTCGG CTCGGCGCAG ACTACAACGT CGCTCCCACC
GATCCGGTGC CGTTGGTTCA GGCCACCGCG GCGGGCCAGC GGGTGCTGTC GCTGGGGCGT
TGGGGCTTTG TCCCGGCGTG GTCGCGGTCC CTGGCCGGCG CTGCTCGCAT GATCAATGCT
CGGGCCGAGA CGGTGGCCAC GAGCCGGGCG TACGCTCGTG CCTTCGCCCG CCACCGCTGT
CTGCTGCCGG CGGACGGCTG GTACGAGTGG GTTCGCCACC CGGGTGGTAA GCAGGCGTAC
TACCTGACTC CTCGGGATGG CTCGGCGGTC GTCTTCGGCG GCATCTGGTC GGTGTGGGAG
GGCCCGGGCG GTCCGTTGCT CACCTGCGGC ATCGTGACCA CCCCCGCCCG TGGTGACCTG
GCCGACGTGC ACGACCGGAT GCCGCTGTTG TTGCCCCGTG AGCGCTGGGG TGCCTGGCTG
GCGTCCACGG ACAGCCCGGT CGACCTGCTC GCGCCGCCGT CGCTGGAGTG GCTGGCCGGG
CTGGAGATTC GTCCGGTTGG GCCGGCGGTT GGCAATGTTC GTAATGACGG TCCGAGCCTC
GTGGAACGGG TCACCGCGGC GGTGCCACGC CGGCGTGGTA GCGGGCCCGG GGAGGAGACG
CTCTTCTGA
 
Protein sequence
MSGVCGRYAT TRSAGDLSAM FESYDETGGR LGADYNVAPT DPVPLVQATA AGQRVLSLGR 
WGFVPAWSRS LAGAARMINA RAETVATSRA YARAFARHRC LLPADGWYEW VRHPGGKQAY
YLTPRDGSAV VFGGIWSVWE GPGGPLLTCG IVTTPARGDL ADVHDRMPLL LPRERWGAWL
ASTDSPVDLL APPSLEWLAG LEIRPVGPAV GNVRNDGPSL VERVTAAVPR RRGSGPGEET
LF