| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3709 |
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| Symbol | |
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| ID | 5060185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4254080 |
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| End bp | 4255648 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475965 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001160518 |
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| Protein GI | 145596221 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.486595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGG CAACCCAGGC GCCGACGCGA CCGAACATCC GGGTCGTGCT CTTTAGCCTG
ATGATCGCCA TGATGCTGGC GATGCTGGAC AACATGATCG TCAGCACCGC CCTGCCGAGG
ATCGTGGGTG AGTTCGGCGG GCTGGACCAC TTCACGTGGG TTGTTACCGC CTATGTTCTC
GGGACGACCG TCTCCACACC GATCTGGGGC AAGCTCGGTG ATCTCTTCGG CCGGAAGCCG
ATCTTCCTGA CCTCGGTCGT GATCTTCCTG CTCGGGTCCG CGCTCTGCGG CATGGCGGGC
TCCCGCCTGC TCGGCGGACC GGACGACGGG ATGGCGGAGC TGATCGCCTT CCGTGCGGTG
CAGGGCCTCG GTGCGGGTGG CCTGATGGTC GGCGTGTTGG CGATCATCGG CGATCTGGTG
CCGCCCCGCG AGCGGGGCCG CTACCAAGGC ATGATCGCCG GGATCATGGC GATCGCCCTG
GTGGCGGGCC CGCTGGTCGG TGGCTTCATC ACCGATCATC TCTCCTGGCG CTGGGCCTTC
TATGTCAACC TGCCCCTCGG CGGGGCCGCG CTGGTGCTGC TCGTCGCCAC CCTGCGTCTG
CCCCGGCACC GTACCGAGCA CCGGATCGAC TGGCTCGGTG CCGCGCTGCT CGCGGTCGGC
ATCACCGCGA TCGTGCTGAT CACCACGTGG GGCGGCAACG AGTACGCCTG GCGTTCTCCG
CAGATCGTTG GCCTGATCGT TCTCGCGCTG GCTTCGCTCG CCGCCTTCGG GGTCGTTGAG
CGGCGGGCGG TTGAGCCGGT CCTGCCGCTT TCGCTCTTCG CCAACCGCAA CTTCGCGCTG
ATCTCGGTGA TCGGCTTCCT GCTCGGCTTC GCGATGTACG GGGCGATGAG CTTTCTGCCG
CTCTACCAGC AGACCGTGCA GGGCGCCTCA GCCACCGAAT CCGGGTTGCT CCTGCTGCCG
TTGATGTTCG GCATGCTGGT GGTATCGCTG TTGGTGGGGC GGACGATCAC CAGGACCGGC
CGGTACCGGG CCTTCCCGAT CATCGGCGGG GTGGTGATGA GCGCGGCGAT GGTCCTGCTG
ACGCGGCTCG ACGCGCAGAC CGACGTGGTG GAGTCCTCGC TCTACCTACT CGTGCTCGGC
GTCGGCATGG GCTTTCTCAT GCAGACGACG ATGCTGATCG CGCAGAACAG CGTTGACCAA
CGTGACCTGG GTGCGGCCAG CGGCGCGGCG ACCTTCTTCC GCTCGATCGG CGGATCGTTC
GGCATCTCGC TCTTCGGGGC CGTTTTCGCC AGCCGGCTGT CCGACTCCCC CGCCGGCGGG
ATATTCGGCG GCGGTGAGGC CGGGACGGCG ATGGACCTCG TGAAGCTTCG GGAGCTACCG
GAGACGCTCC GGGAACTGGT CCTCGGCGGC CTCGCCGACG CGGTCTCGCA CGTGTTCCTG
TGGGCCCTGC TGTTCACCCT CGTGGTGCCG GTGTTCGCCT GGCTCATCAG GGAGATTCCG
CTGCGTACCG AGAACATCTC GGTACCGGCG GGGGAGGCGG AGCGCCAGCG CCCGGATGTC
GATCGCTGA
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| Protein sequence | MAQATQAPTR PNIRVVLFSL MIAMMLAMLD NMIVSTALPR IVGEFGGLDH FTWVVTAYVL
GTTVSTPIWG KLGDLFGRKP IFLTSVVIFL LGSALCGMAG SRLLGGPDDG MAELIAFRAV
QGLGAGGLMV GVLAIIGDLV PPRERGRYQG MIAGIMAIAL VAGPLVGGFI TDHLSWRWAF
YVNLPLGGAA LVLLVATLRL PRHRTEHRID WLGAALLAVG ITAIVLITTW GGNEYAWRSP
QIVGLIVLAL ASLAAFGVVE RRAVEPVLPL SLFANRNFAL ISVIGFLLGF AMYGAMSFLP
LYQQTVQGAS ATESGLLLLP LMFGMLVVSL LVGRTITRTG RYRAFPIIGG VVMSAAMVLL
TRLDAQTDVV ESSLYLLVLG VGMGFLMQTT MLIAQNSVDQ RDLGAASGAA TFFRSIGGSF
GISLFGAVFA SRLSDSPAGG IFGGGEAGTA MDLVKLRELP ETLRELVLGG LADAVSHVFL
WALLFTLVVP VFAWLIREIP LRTENISVPA GEAERQRPDV DR
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