Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3688 |
Symbol | |
ID | 5060164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4228804 |
End bp | 4229739 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640475944 |
Product | ABC transporter related |
Protein accession | YP_001160497 |
Protein GI | 145596200 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.382746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGACG GACGGTCGAG CCCCGACACC ACAGGCGAGA TCGTGGTCTC CCGGCTGACG AAGATTTACG GCAGCGCTCC CGCGGTCGAC GACCTGTCGT TCCGGGTGGA GCCGGGTCGG GTCACCGGAT TCCTGGGCCC GAACGGCGCC GGCAAGACCA CCACGCTGCG CATGCTGCTG AACCTGGTCA CCCCGACGGC TGGCCAGGCG ACCATCGGCG GGCGGCGGTA TGCCAACCTG ACCGACCCGG TGCGGCATGT CGGCGCGGTG CTGGAGGCGT CCAGCGCACA CAAGGGGCGC ACCGGCATCA ACCACCTGCG GGTGATCTGC ACCGCAGCCG GGCTGCCCCG TTCCCGCGCC GACGAGGTGC TGGCCCAGGT CGGTCTGGCA CCAGCGGCCC GGCGCAAGTT CAAGGGCTAC TCGTTGGGGA TGAAGCAGCG CCTGGGCATC GCCGCGGCGA TGCTCGGCGA CCCCCGGGTG CTGATCCTGG ACGAGCCGGC CAACGGGCTC GACCCGGAGG GCATTCGGTG GATGCGTGGC TTCCTGAAGA GCCTGGCCGC CGAAGGGCGT ACGGTCCTGG TCTCCAGTCA CCTGCTGTCG GAGATGCAGC TGCTCGCGGA CGATGTCGTC ATCATCGCGG CCGGCCGGCT GATCCGGCAG GGCCCGGTGG ACCAGGTCAT CGGCTCGATG GCGCAGACCG CCCGGGTCCG GGTGCGCTCC CCGCAGGCCG AGACGCTGCG GGCCGCACTC GAGCGGGAGT CGGCGACCGT GGACGTTGAC GACCAGGGGG CCCTGCTGGT CGGGGGCGTG GACGCACCGA CGGTCGGCCG GGTGGCCCTG GCCGCCAGCG TGGAGCTGCA TGAACTGGCC ACCGAACGTC CTGACCTTGA GGGCGTCTTC CTCGAGCTTA CGGCCGGAAA GGCGGGCATC CGATGA
|
Protein sequence | MTDGRSSPDT TGEIVVSRLT KIYGSAPAVD DLSFRVEPGR VTGFLGPNGA GKTTTLRMLL NLVTPTAGQA TIGGRRYANL TDPVRHVGAV LEASSAHKGR TGINHLRVIC TAAGLPRSRA DEVLAQVGLA PAARRKFKGY SLGMKQRLGI AAAMLGDPRV LILDEPANGL DPEGIRWMRG FLKSLAAEGR TVLVSSHLLS EMQLLADDVV IIAAGRLIRQ GPVDQVIGSM AQTARVRVRS PQAETLRAAL ERESATVDVD DQGALLVGGV DAPTVGRVAL AASVELHELA TERPDLEGVF LELTAGKAGI R
|
| |