Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3679 |
Symbol | |
ID | 5060155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4219116 |
End bp | 4220159 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640475935 |
Product | fatty acid desaturase |
Protein accession | YP_001160488 |
Protein GI | 145596191 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3239] Fatty acid desaturase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCGGC AGATGGTGGC GGATCCGCCG GTACGGGGCA GTGAGTACGC CGAGTTGTCC CGGCAGATTC GGGCGGCAGG ACTCCTGGAA CGTCGTCCGG GCTGGTACGC GGTTCGGATC GGGTTGACCA CCGCGTCTTT CGGCGCGGTC TGGGCTCTGG TCGTACTTGT CGGCGACTCC TGGGGGCAGG CAGCGGTCGC GGCACTGATG GCGGTGGCCA GCACCCAGGT GGCCTTCCTC GGTCACGACG CCGGGCACCG GCAGATGTTC CGGCGGCGTG GGCCCAGTGA ACTGGTCGGC CTGCTCGCCG GGAACCTGGC GGTCGGGCTC AGCTACGGAT GGTGGGTGGA GAAGCACAAC CGGCACCACG CCAACCCCAA CCACGCCGAC GAGGACCCGG ACGTGGGGGC GGGGGCGTTG GTCTGGTCGG TGGAACAGGC CGGTGCGACC CGGGGGTTCG CCCGGTGGCT GGCTCGCCGG CAGGCGTTCC TCTTCTTTCC GATGCTGCTG CTGGAAGGGC TGAACCTGCA TCTGTCGAGC CTGCGAGCTA TCGCCGGTCG GGGGCCGGAC GGGCGGTTTG AGACACCGAT GCGGCACCGG GGTGCCGAGG CGTTCCTGCT CGCCGCACAC ACCATCCTCT ACGTCGGCGG CTTGCTGCTG GTGATGTCCC CCGGGAAGGC GTTGGTCTTC GCGGCTGTCC ACCAGGGGCT GTGGGGGCTG TACATGGGGT GCTCGTTCGC TCCGAATCAC AAGGGTATGC CGATGCCGAC CGCCGTTGAT GAGTTGGACT TCCTGCGGAA GCAGGTGATC ACTTCACGCA ACGTACGCGG GGGCTGGTTT GTCGACTTTG CGTTGGGTGG GTTAAACCAT CAGATCGAGC ACCATCTGTT TCCTAATATG CCACGCGGCA GCCTGCGCCG GGCTCGACCG ATCGTCCGGG CCTACTGCGC GCAGCGGGGT GTCCCGTACG TCGAGGTGGG ACTGGTCGAG TCGTACCGGC AGGCGCTCGC GCACCTGCAT GCGGTTGGCC AACCGCTACG TTGA
|
Protein sequence | MMRQMVADPP VRGSEYAELS RQIRAAGLLE RRPGWYAVRI GLTTASFGAV WALVVLVGDS WGQAAVAALM AVASTQVAFL GHDAGHRQMF RRRGPSELVG LLAGNLAVGL SYGWWVEKHN RHHANPNHAD EDPDVGAGAL VWSVEQAGAT RGFARWLARR QAFLFFPMLL LEGLNLHLSS LRAIAGRGPD GRFETPMRHR GAEAFLLAAH TILYVGGLLL VMSPGKALVF AAVHQGLWGL YMGCSFAPNH KGMPMPTAVD ELDFLRKQVI TSRNVRGGWF VDFALGGLNH QIEHHLFPNM PRGSLRRARP IVRAYCAQRG VPYVEVGLVE SYRQALAHLH AVGQPLR
|
| |