| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3652 |
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| Symbol | |
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| ID | 5060127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4184695 |
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| End bp | 4186107 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640475907 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001160461 |
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| Protein GI | 145596164 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGAGCAC ACGAGGCCGG CGCCCTGCAT GGGGAGATCG GCAGCCAGGG GGCGGCGTGG
CTGCGTGTCC CGCGGGACGT GAACGCGTTG GTGCCAGCGC TGTGGCCGCG TACCGTCAGC
CGGGCGGCGG ACGGCGCGCT CGCCGTCGCG GGCTGCTCGG TGCGGGATCT CGCGGCCGAG
TTCGGCACCT CGGTGTACCT CCTGGACGAG GAGGACCTGC GGAGTCGCTG CCGGGACTTC
CGGGCTGCCT TCCCGACCGA GGATGTCTAC TACGCCGGTA AGGCGTTCCT CTGCCGGGCG
GTGGCGCGGA TGGTCGCCGA GGAGGGCCTG CACCTGGACG TGTGCAGTGG TGGCGAGTTG
GCCACTGCGC TGGCTGCCGG GGTGCCGCCG GAGCGGATCG GCTTCCACGG CAACAACAAG
TCGATCGCCG AGCTGAGCCG GGCGTTGGAT GTCGGGGTGG GGCGGATCAT CGTCGACTCA
TCCCACGAGA TCGACCGACT CACCGCGCTG GCTCGCGAGC GGGGTGTCCG CCCGCGGGTG
CTGGTGCGGG TCACCGTCGG CGTGGAGGCG CACACCCACG AGTTCATCGC CACCGCGCAC
GAGGACCAGA AGTTCGGCTT CTCGTTGGCG GAGGGCGCGG CGATCGCCGC CGTGCTGCGC
ATCCTCGACG AGGACGTGTT GGAGCTGCGC GGTCTGCACT CGCACATCGG GTCGCAGATC
TTCGACGCGA GCGGCTTCGA GGTCTCCGCC CGCCGGGTGC TGGCGCTGCA GGCGCAGATC
CGCGACGCGC GGGGGGTACA GCTACCGGAG CTGGACCTGG GCGGCGGGTT CGGTATCGCG
TACACCTCGC AGGACGATCC GGCCACGCCG GCCGATCTGG CGAAGCGTCT ACGCAAGATC
GTTGACGGGG AGTGCGCCGC CGAGCGGCTG GCGGTGCCGC ACCTGTCGAT CGAGCCGGGC
CGGGCGATCG TCGGCCCGGC CATGTTCACG CTCTACGAGG TGGGCACGGT CAAGTCCGTG
CCGGTCGGCA CCGGTGGTGA CGCGGTCGAT GGGCGCCGTT GTTATGTGAG TGTCGACGGC
GGCATGAGCG ACAACATCCG CACAGCGCTC TACGATGCGT CGTACTCGGC GACCCTGGCG
TCTCGAGCGA GCGTTGCCGA GCCAGTGCTT GCCCGCGTTG TGGGAAAGCA CTGTGAGTCC
GGGGACATCG TGGTGAAGGA TGAATTCCTG CCCGCCGACG TGCAGCCGGG AGATCTTGTC
GCCGTGCCCG GCACGGGTGC GTACTGCCGG AGCATGGCCA GCAACTACAA CCATGTGCCA
CGCCCCCCGG TGGTCGCGGT GCGCGACGGC CGGGCTCGCC TGATCGTCCG CCGGGAAACC
GAAGAGGACC TGCTCGCTTT GGATGTGGGA TGA
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| Protein sequence | MRAHEAGALH GEIGSQGAAW LRVPRDVNAL VPALWPRTVS RAADGALAVA GCSVRDLAAE
FGTSVYLLDE EDLRSRCRDF RAAFPTEDVY YAGKAFLCRA VARMVAEEGL HLDVCSGGEL
ATALAAGVPP ERIGFHGNNK SIAELSRALD VGVGRIIVDS SHEIDRLTAL ARERGVRPRV
LVRVTVGVEA HTHEFIATAH EDQKFGFSLA EGAAIAAVLR ILDEDVLELR GLHSHIGSQI
FDASGFEVSA RRVLALQAQI RDARGVQLPE LDLGGGFGIA YTSQDDPATP ADLAKRLRKI
VDGECAAERL AVPHLSIEPG RAIVGPAMFT LYEVGTVKSV PVGTGGDAVD GRRCYVSVDG
GMSDNIRTAL YDASYSATLA SRASVAEPVL ARVVGKHCES GDIVVKDEFL PADVQPGDLV
AVPGTGAYCR SMASNYNHVP RPPVVAVRDG RARLIVRRET EEDLLALDVG
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