| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3602 |
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| Symbol | |
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| ID | 5060077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4118974 |
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| End bp | 4120836 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640475857 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001160411 |
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| Protein GI | 145596114 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.438732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAT CGACCGGGTC ACTCGGCCGG GGCCGTCCGC GGATCGGACT CTCGCCCAAG
GAGATCTGTG GCATGAACGT GTGGAGAAGA CTCTCCGTCC CGCGCCCGGC CCTCGCGCTG
ACCGGCGCGG GCGTCCTGGT CGTAGGCGGG TTGGTGACCC TGCCGGTCAC CATGGCCCAC
GCTGCGACCC AGTGTGAGGT GTCGTACACC ACCAATGACT GGCCCGGCGG TTTCACCGCT
TCCCTCAGTA TCAAGAACAC CGGGGAGGCG CTGGATGGCT GGACGCTTCG CTTCACCTTC
CCGAACAGTA GCCAGCAGGT GGTGCACGGC TGGTCGGCTC GGTACAGCCA GTCCGGGCAG
AACGTTGCCG TGCAGAACGA GTCGTACAAC GGTTTGGTGC CCAGTGGCGC CACCATCGAG
ATCGGCTTCA ACGGTTTGTG GAGTGGCAGC AACCCCAAAC CGACGTCGTT CACGCTCAAC
GAGGTGGCCT GCAACGGCGG TGGTGGCCCC ACTACGGCAC CGCCGACAAC TACGCCGCCC
ACCACGGCAC CGCCGACGAC CCCACCTCCC ACCACTCCAC CTCCCACCAC CGCGCCTCCC
GGAGGCCGAG TGGACAACCC GTACCTGAAC GCGGTGGGCT ACGTGAATCC GGAGTGGAAG
GCCAAGGCCG AGTCAGTGTC CGGTGGCAAC CGGGTGTCGA ACACGTCGAC GGCCGTCTGG
ATCGACCGGA TTGCGGCCAT TGAGGGTACC GATGACAGCC AGTCCAATGG CCCGATGGGC
ATACGAGATC ACCTGGATGA GGCGCTGAGT CAGGGGGCGG ACTACATCCA GTTCGTGATC
TACAACCTAC CCGGTCGGGA CTGCGCTGCG CTCGCCTCGA ACGGTGAACT GGCACCGGAC
GAGTTGCCCC GCTACAAGGC CGAGTTCATC GACCCGATAG CGGCGATCCA GAGTGACGCG
GCATACCAGG ATCTCCGGAT CATCAACATC ATCGAGATCG ACTCGTTGCC GAACCTGCAC
GCCAACACCG GCAGCAATCC GGGCGCTACC CCGACCTGTG AGCTTGTCAA GCAGAACGGC
GCCTATGTCA ACGGCATCGG CTACGCGCTG GCCACGTTGG GCGCGATCAG CAACGTCTAC
AACTACGTGG ACGCTGCCCA CCACGGCTGG ATCGGCTGGG ACACCAACTT CAGCCCGGTC
GCCCTGCTCC TGAAGGATGC TGCCACAGCG TCCGGCAGCA CGCTCGACGA CGTGCATGGC
TTCATCGTCA ACACCGCCAA CTACTCGGCA TTGCGCGAGC CCTACTTCCA GATCACCGAC
ACGGTCAACG GCCAGACGAT CCGTCAGTCC ACGTGGGTGG ACTGGAACCA GTACGTCGAC
GAGTTGTCGT TTGCGCAGGA CTTCCGCGAC GAACTAGTTG CCAAGGGATT CGACTCGGGT
GTGGGAATGT TGATCGATAC TTCCCGCAAC GGTTGGGGTG GCAGTGCTCG ACCAACCGCC
CCTGGGCCGA CGACCGATGT GGACAGCTAT GTCGACGGTG GTCGGGTCGA CCGACGAATC
CACGCCGGGA ACTGGTGCAA CCAGTCTGGT GCGGGCCTGG GTGAGCGGCC GCAGGCCGCG
CCGGAGCCCG GTATCGACGC CTATGTCTGG GTAAAGCCGC CGGGCGAGTC GGACGGCTCC
AGCGAGGAGA TCCCGAACAA CGACGGCAAG GGCTTTGACC GGATGTGCGA CCCGACGTAC
GAGGGCAACG CCCGTAACGG CTTCAACCCC AGCGGTGCCC TGCCTGACGC GCCGATCTCC
GGTGCCTGGT TCCCGGCGCA GTTCCAGCAG CTCATGCAGA ACGCCTACCC GCCGCTGTCC
TGA
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| Protein sequence | MSASTGSLGR GRPRIGLSPK EICGMNVWRR LSVPRPALAL TGAGVLVVGG LVTLPVTMAH
AATQCEVSYT TNDWPGGFTA SLSIKNTGEA LDGWTLRFTF PNSSQQVVHG WSARYSQSGQ
NVAVQNESYN GLVPSGATIE IGFNGLWSGS NPKPTSFTLN EVACNGGGGP TTAPPTTTPP
TTAPPTTPPP TTPPPTTAPP GGRVDNPYLN AVGYVNPEWK AKAESVSGGN RVSNTSTAVW
IDRIAAIEGT DDSQSNGPMG IRDHLDEALS QGADYIQFVI YNLPGRDCAA LASNGELAPD
ELPRYKAEFI DPIAAIQSDA AYQDLRIINI IEIDSLPNLH ANTGSNPGAT PTCELVKQNG
AYVNGIGYAL ATLGAISNVY NYVDAAHHGW IGWDTNFSPV ALLLKDAATA SGSTLDDVHG
FIVNTANYSA LREPYFQITD TVNGQTIRQS TWVDWNQYVD ELSFAQDFRD ELVAKGFDSG
VGMLIDTSRN GWGGSARPTA PGPTTDVDSY VDGGRVDRRI HAGNWCNQSG AGLGERPQAA
PEPGIDAYVW VKPPGESDGS SEEIPNNDGK GFDRMCDPTY EGNARNGFNP SGALPDAPIS
GAWFPAQFQQ LMQNAYPPLS
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