| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3587 |
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| Symbol | |
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| ID | 5060062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4101130 |
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| End bp | 4102473 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640475842 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001160396 |
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| Protein GI | 145596099 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.69287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTCT TCGCCAGACC ACACCAAGCC TTCGTAGTAG CTGGCGTGCT CGGCCTGGCC
GTCGGCGCCA CCGCCTGCGG TAGTGACGAC GACGGCAGCA GCAGGGCCGA TTCCCCAGAG
TGCGCGGTAT ACGAGCAGTA CCAGGGCAAC GGCGGCACCG AGGTCTCCAT CTACGCGTCC
ATCCGCGACG CGGAGGCGGA CCTGCTCGAA CAGTCGTGGG AGCAGTTCGC AGACTGCACC
GGCATTGAGA TCGACTACGA GGGCAGCGGC GAATTCGAGG CACAGCTCCA GGTCCGGGTA
GACGGTGGCA ATGCGCCCGA CATCGCCTTC ATCCCACAGC CGGGCCTGCT GAAGCGCTTC
GCGCAGGCCG GCAAGCTCAC ACCGGCCTCG GCCGAGACCA CGGCGATGGC CGAGGAGAAC
TACGCCGCCG ACTGGCTGCG GTACAGCACC ATCGGGGGAG AGTTCTACGG CGCTCCGCTG
GGCTCGAACG TCAAGTCATT CGTCTGGTAC TCGCCGACGA TGTTCCAGGA GCAGGGCTGG
TCGGTGCCGA CCAGCTGGGA CGATCTGATC GAACTCAGTG ACCGGGCCGC CGCCGACGGC
ATCAAGCCGT GGTGCGTCGG CATCGAGTCC GGTGACGCCA CCGGCTGGCC AGCCACCGAC
TGGATCGAGG ACGTACTGCT GCGGACGCAG ACCCCCGAGG TCTACGACCA GTGGACCACA
CACGCCATCC CCTTCAACGA CCAGCGTGTC GTGGACGCGG TCGAACGGGC CGGCACCATT
CTGCGAAACG ACCGGTACGT CAACGGCGGC TACGGCGGCG TCAAGAGCAT CGCCACCACC
TCGTTCCAGG AGGGCGGTCT GCCGATCCTC CAAGACGAGT GCGCCCTGCA CCGGCAGGCG
TCGTTCTACG CCAACCAGTG GCCCGAGGAG AGCCGGGTGG CCGAGGACGG CGACATATTC
GCGTTCTACT TCCCGCCCAT CGACCCGGCG AAGGGCAAGC CGGTGTTGGG AGGCGGCGAG
TTCACCGTCG CCTTCGACGA CCGCCCGGAG GTCCAGGCGG TGCAGACCTA CCTCGCCTCC
GGTGAGTACG CCAACGGCCG GGCCAAGCTG GGCAACTGGG TGTCGGCGAA CACGAAGCTC
GACCTCTCGA ACGTGACCAA CCCGATCGAC CGGCTCTCGG TCGAAATCCT TCAGGACGAG
CAGACAGTCT TCCGCTTCGA CGGCTCCGAC CTGATGCCCG CCGCCGTCGG CGCCGGAACG
TTCTGGAAGG AGATGGTGTC CTGGATCAGC GGCAAGGACA CCGTGGCAGC CCTGGACGCC
ATCGAGAGTT CCTGGCCCAG CTGA
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| Protein sequence | MAVFARPHQA FVVAGVLGLA VGATACGSDD DGSSRADSPE CAVYEQYQGN GGTEVSIYAS
IRDAEADLLE QSWEQFADCT GIEIDYEGSG EFEAQLQVRV DGGNAPDIAF IPQPGLLKRF
AQAGKLTPAS AETTAMAEEN YAADWLRYST IGGEFYGAPL GSNVKSFVWY SPTMFQEQGW
SVPTSWDDLI ELSDRAAADG IKPWCVGIES GDATGWPATD WIEDVLLRTQ TPEVYDQWTT
HAIPFNDQRV VDAVERAGTI LRNDRYVNGG YGGVKSIATT SFQEGGLPIL QDECALHRQA
SFYANQWPEE SRVAEDGDIF AFYFPPIDPA KGKPVLGGGE FTVAFDDRPE VQAVQTYLAS
GEYANGRAKL GNWVSANTKL DLSNVTNPID RLSVEILQDE QTVFRFDGSD LMPAAVGAGT
FWKEMVSWIS GKDTVAALDA IESSWPS
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