Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3556 |
Symbol | |
ID | 5060030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4076347 |
End bp | 4077039 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640475810 |
Product | single-strand binding protein |
Protein accession | YP_001160365 |
Protein GI | 145596068 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGACA CGCACGTCAC GGTGATCGGC ACCGCCGTGA CCGCCCCCGA GTGGCGGCGC ACCACCCAGA GCCAGACCCT GGTGGCCAAC TTCAAGGTGG CCTCCACCGC ACGTCGCCTC GACCGCGAGA GCGGTCGCTG GGTCGATGGC AACAGCCTTC GCCTGCGGGT CAACTGCTGG CGTCGGCTCG CCGAGGGGGT CGCGGCGTCG GTGATGGTCG GCGACCCAGT GATCGTGTCC GGGCGCCTCT ACACCCGGGA CTGGACCGAC GATGCCGGTA GCCACCGAAC CCACTACGAA CTGGAGGCCG TCGCGGTCGG CCACGACCTG TCCCGCGGCC GAGGTCGGTT TCTGCGAAAC CGGCCGGCGA CCACGACCAG TAACACGGCG GATCCCACAG CGGATCCGCG GGTGCCCGGT GAGCAGACCG AGTCGGCGTT GTCCGCCCCC GCCGACCGGC AGGTCGACGA GGAAGTCGAG CTGGCCGCAC CCCACGACCA CCCGACCGCT GCCGGTGCCG ACGTGGACCC CCTGGACGAT CCGACCGCTG AGGCGGACCG GGGCGACGCT GCTTCTGGTC AAACCGACGG GTTCGTCTCC GCCGGGAGTC CGGGTGGGCC AGCGGAGCCG ACCGATGGGG CCAGCCGAGC CGATGCGGCC GGCCAGAGGC GCCGAGCCGG CACCCGGCGG TAG
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Protein sequence | MFDTHVTVIG TAVTAPEWRR TTQSQTLVAN FKVASTARRL DRESGRWVDG NSLRLRVNCW RRLAEGVAAS VMVGDPVIVS GRLYTRDWTD DAGSHRTHYE LEAVAVGHDL SRGRGRFLRN RPATTTSNTA DPTADPRVPG EQTESALSAP ADRQVDEEVE LAAPHDHPTA AGADVDPLDD PTAEADRGDA ASGQTDGFVS AGSPGGPAEP TDGASRADAA GQRRRAGTRR
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