| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3506 |
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| Symbol | |
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| ID | 5059980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4025666 |
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| End bp | 4026490 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475760 |
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| Product | transcription activator, effector binding |
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| Protein accession | YP_001160315 |
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| Protein GI | 145596018 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0789] Predicted transcriptional regulators
[COG4978] Transcriptional regulator, effector-binding domain/component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.771694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACC TGATCCCGAT CGGGCGTTTC TCCCGGATGA GCCGGCTGTC GGTGAAGGCC
CTGCGCTTCT ACGACAAGCA GGGCCTGCTC GCACCGGCTT GGGTCGACCC GTCCTCGGGC
TACCGCTACT ACCGGCGAGC CCAGGCCGGG CGGGCCGAGG CGATCCGGGT ACTGCGCGCG
ATCGACATGC CGGTCGGGGA TATCCGCGAC CTGCTCGCCG ACGACGACCC GGAACTGACC
GGCAAGCGCC TCGTCGCACA CCGGGAGCGG TTACGGGCCC GGCTCGCCGA GCAGGAGCGG
ATGCTGCGGT TCCTCGAAGA ACTCATCGAT CGAGGAGGAC ATGTCATGCC CTACGACGTC
ATCGTGAAGG AAGTCGAGAC CGTTCCGGTC GCCAGCCTCA CCCTGCACAC CAGCCTCGAT
GCGATCGGCG CCGACATGGG CCGCGGCTTC GGCACGGTTG TCGACGCCAT CGGCAACGCC
GGCACCGAGG CCAACGGCAA GCCGTTCGTC GTCTACCACG ACGTCATCGA CGAGCAGACC
ACTGGCGACA TCGAGATCTG TATCCCGGTT CCGGCCGGCA CCGTCCTGCC CAGCGGCCCG
GTCCGCTACC GCGAGCTCCG CGGCGGCCCG ATCGCCTCCA CCGTCCATCG AGGGCCTTAC
CAGGAGATCA GCCCCGCCTA CCACGTCGTC ACCGGCTGGA TCGAGCAGGA GGGTGTGCAT
CCGGCGGGCC CGCCGCGCGA GGTCTACCTC AACGACCCTC AAACGGTCAG TCCTGCCGAG
CTGCTCACCG AGGTGCAGTT CCCCATCGAC AAGGCGTCGC ACTGA
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| Protein sequence | MDDLIPIGRF SRMSRLSVKA LRFYDKQGLL APAWVDPSSG YRYYRRAQAG RAEAIRVLRA
IDMPVGDIRD LLADDDPELT GKRLVAHRER LRARLAEQER MLRFLEELID RGGHVMPYDV
IVKEVETVPV ASLTLHTSLD AIGADMGRGF GTVVDAIGNA GTEANGKPFV VYHDVIDEQT
TGDIEICIPV PAGTVLPSGP VRYRELRGGP IASTVHRGPY QEISPAYHVV TGWIEQEGVH
PAGPPREVYL NDPQTVSPAE LLTEVQFPID KASH
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