| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3493 |
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| Symbol | valS |
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| ID | 5059962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4005665 |
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| End bp | 4008283 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640475742 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001160302 |
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| Protein GI | 145596005 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.180306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAGA GACTGGATGC CCAACGCCCC GACGCCCCGA CCCTTGCCGG CCAGTACCTG
CCGGGCGAGG TGGAGCAGCG ACGGTACGAG CAGTGGGTAG CCGGCGGACA CTTCCGCGCG
TCGGCGGAGA GCGACAAGCC CCCGTACACC ATCGTCATCC CGCCGCCGAA CGTCACCGGC
TCGCTGCACA TGGGGCACGC GCTGGACCAC ACGATGCAGG ACGCTCTGGT CCGGCGCAAG
CGGATGCAGG GCTACGAGGC GCTGTGGGTG CCCGGAATGG ATCACGCCGG CATCGCCACC
CAGAACGTTG TGGAGCGGCA GCTGGGCGAG CAGGGTCTGT CCCGGCATGA CCTCGGCCGG
GAGGCGTTCG TTGAACGGGT CTGGGAGTGG AAGGCCGAGT CCGGTGGCGC GATTCTTGGG
CAGATGCGCC GGCTCGGCGA CTCTGTCGAC TGGGAGCGGG AACGCTTCAC CATGGACGCG
GGCCTGTCGC GGGCCGTCCA GACCATGTTC AAGGCGCTGT ACGACGACGG GTTGATCTAC
CGGGCCGAGC GGATCATCAA CTGGTGCCCG CGCTGCCTGA CCGCGCTGTC GGACATCGAG
GTGGAGCACA CGGACGACGA CGGTGAGTTG GTGTCGATCC GCTACAGCGA CGAGGTCGTG
GTGGCGACCA CCCGGGCGGA GACGATGCTC GGTGATACCG CCGTCGCGGT GCATCCCGAG
GACGAGCGGT ATCAGCATCT GATCGGCACC GAGGTCGAGC TGCCGCTGAC CGGCCGGTGC
ATTCCGATTG TCGGTGACGA GCACGTTGAC CCGACCTTCG GCACCGGCAT GGTGAAGGTG
ACGCCGGCGC ACGACCCGAA CGACTTCGAG ATCGGCCAGC GGCACGACCT GCCGTCCCTC
ACGATCATGG ACGAACGGGG GGTCATCACC GCGCACGGGC CGTTCGCGGG CCTGGATCGG
TACGAGGCGC GTCCCGCCAT CGTCGCCGCC CTGCGTGAGC AGGGCCGGAT CGTGGCCGAG
AAGCGCCCGT ACACGCATGC GGTCGGTCAC TGCTCGCGCT GCCGCACGTC GGTGGAGCCC
CGGCTGTCGT TGCAGTGGTT CATCAACACC TCGCCGTTGG CGAAGGCGGC TGGTGACGCG
GTGCGGGACG GACGGGTGAG GATTGAGCCG GCGGAGCTGG CCAAGCGGTA CTTCGCCTGG
GTCGACAACA TGCACGACTG GTGCATCTCC CGCCAGCTGT GGTGGGGGCA CCGCATCCCG
GTCTGGTACG GCCCGGCCGG TGAGGTCGTC TGCGTCGGCC CGGACGAGAC GCCGCCGGCC
GGTGCCGGTT GGCGCCAGGA CGAGGATGTC CTGGACACCT GGTTCTCCAG CGGCCTGTGG
CCGTTCTCCA CTCTCGGCTG GCCGGAGCAG ACCCCGGAGT TGGCCAAGTT CTACCCGACG
AGCGTCCTGG TCACCGGCTA CGACATCCTC TTCTTCTGGG TCGCCCGGAT GATGATGTTC
GGCCTGTACG CGATGGACGG CCGGCAGCCC TTCGACGTGG TCGCGCTGCA CGGCATGGTC
CGTGACGAGC ACGGCAAGAA GATGTCGAAG TCGTTCGGCA ACGTGATTGA CCCGCTGAAC
TGGATTGATC GGTTCGGCGC CGATGCCACC CGCTTCACCC TGACCCGTGG CGCGAACCCC
GGCGGGGACG TCGCCGTCAG TGAGGAGTGG TGCCAGGGCT CCCGGAACTT CTGCAACAAG
CTCTGGAACG CGACTCGGTT CGCGTTGTTG AACGGTGCAC ACACCCAGGG GGCGCTCCCG
TCGGCGACGG AACTGGCACC AGTCGACCGG TGGGTCCTGT CCCGGCTCGC GCGCGTCACC
GCGGAGGCGG AGGAGCAGTT CGAGGCGTAC GAGTTCGCGA AGGCGTGTGA CCTGCTGTAC
CACTTCGCGT GGGATGAGGT CTGCGACTGG TACGTGGAGT TGACCAAGCC GCTACTGGCC
GCCGGCGGTC CGGCTGCGGA CACCACCCGG CGGGTCCTCG GGCATGTGCT GGACCAGCTG
CTGCGGCTGC TGCACCCGGT GATCCCATTC GTCACCGACG AGTTGTGGAT CGCACTGACC
GGCGGTCAGA CGATCATGAC GGCGGCGTGG CCGGCCGCTG ACCGGGCGTT GGTCGACGCC
GCCGCGGAGA CGGAGATCTC CACGCTCCAG CGGGTGGTCA CCGAGATCCG GCGGTTCCGC
TCTGACCAGG GGCTGCGCCC GACTCAGCGG GTCGTCGCCC GGCTCGACGG GCTGGCCGGT
GCCGGTATCG CCGGGCACGA ACCGCTGGTC CGTTCGCTGG TGCGCCTTGA TGCGGCGGGC
GCCGACTTCC AGGCCAGCGC CACCCTTACC CTGCCCGGTG AGGTGTGTGT CGCGCTGGAC
ACCCGCGGTT CGATCGACGT GGCGGCCGAG CGGGCACGGT TGACCAAGGA CCGTGCCGCG
GCGGCGAAGG AGGCCGGACA GGCCCGGACG AAGCTCGACA ACCCGGCGTT CGTGGGGAAG
GCACCCGAGC CGGTGGTGCA GAAGATCCGC GACCGGCTCA CCGCCGCCGA GGCCGACCTG
GTGCGCATCG ACGCCGCTCT GGAGGCATTG TCCTCGTGA
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| Protein sequence | MTERLDAQRP DAPTLAGQYL PGEVEQRRYE QWVAGGHFRA SAESDKPPYT IVIPPPNVTG
SLHMGHALDH TMQDALVRRK RMQGYEALWV PGMDHAGIAT QNVVERQLGE QGLSRHDLGR
EAFVERVWEW KAESGGAILG QMRRLGDSVD WERERFTMDA GLSRAVQTMF KALYDDGLIY
RAERIINWCP RCLTALSDIE VEHTDDDGEL VSIRYSDEVV VATTRAETML GDTAVAVHPE
DERYQHLIGT EVELPLTGRC IPIVGDEHVD PTFGTGMVKV TPAHDPNDFE IGQRHDLPSL
TIMDERGVIT AHGPFAGLDR YEARPAIVAA LREQGRIVAE KRPYTHAVGH CSRCRTSVEP
RLSLQWFINT SPLAKAAGDA VRDGRVRIEP AELAKRYFAW VDNMHDWCIS RQLWWGHRIP
VWYGPAGEVV CVGPDETPPA GAGWRQDEDV LDTWFSSGLW PFSTLGWPEQ TPELAKFYPT
SVLVTGYDIL FFWVARMMMF GLYAMDGRQP FDVVALHGMV RDEHGKKMSK SFGNVIDPLN
WIDRFGADAT RFTLTRGANP GGDVAVSEEW CQGSRNFCNK LWNATRFALL NGAHTQGALP
SATELAPVDR WVLSRLARVT AEAEEQFEAY EFAKACDLLY HFAWDEVCDW YVELTKPLLA
AGGPAADTTR RVLGHVLDQL LRLLHPVIPF VTDELWIALT GGQTIMTAAW PAADRALVDA
AAETEISTLQ RVVTEIRRFR SDQGLRPTQR VVARLDGLAG AGIAGHEPLV RSLVRLDAAG
ADFQASATLT LPGEVCVALD TRGSIDVAAE RARLTKDRAA AAKEAGQART KLDNPAFVGK
APEPVVQKIR DRLTAAEADL VRIDAALEAL SS
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