| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3487 |
|---|
| Symbol | ileS |
|---|
| ID | 5059956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3996797 |
|---|
| End bp | 3999976 |
|---|
| Gene Length | 3180 bp |
|---|
| Protein Length | 1059 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640475736 |
|---|
| Product | isoleucyl-tRNA synthetase |
|---|
| Protein accession | YP_001160296 |
|---|
| Protein GI | 145595999 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTATC CGTTGCATGA CCCGACCGCG ACCGGAGTCC CTGCGAGCCC GGACCTGCCC
GCGATCGAGC GCCGGGTCCT GGAGCACTGG ACGGCCGACA AGACCTTCGA GGCCTCCATC
GAGGCCCGAC CGGCCTCCCG ACGATCGGCG GACGGCGTCG TCGCCGACGG CGCCCCCGCC
GACAACGAGT ACGTCTTCTA CGACGGTCCG CCGTTCGCCA ACGGCCTGCC GCACTATGGC
CACCTCTTCA CCGGCTACGT CAAGGACGTG GTGCCGCGCT ACCAGACCAT GCGTGGGCAG
CGGGTGGAGC GTCGGTTCGG TTGGGACTGC CACGGCCTGC CCGCCGAGGT GGTCGCCGAG
AAGCAGCTCG GCATCACCAG CAAGGCGGAG ATCCTCGATC TGGGGGTGGA CCGGTTCAAC
GCGGCCTGCC GGAGCTCGGT GCTGGAGTTC ACCCACGACT GGGAGCGCTA CGTCACCCGT
CAGGCCCGTT GGGTCGACTT CTCCAGTGCC TACAAGACGC TGAACCTGGA CTACATGGAG
AGCGTCCTGT GGGCCTTCAA GAGCCTGCAC GACAAGGGCC TGGTCTATGA GGGCTTCCGG
GTGCTCGCGT ACTGCTGGCG GTGCGAGACG CCGTTGTCGA ACACCGAGAC CCGGATGGAC
GACGTCTACC GGGACCGGCA CGACCCGACG CTCAGCGTGT GGTTGACGCT CACACCCGAC
GAGAGCGCAC CGGAGCTGCT GCGCGGCACC GTCGCGCTGG GGGTCTGGAC CACCACGCCG
TGGACGCTGC CGTCCAACCT GGCGCTCGCC GTTGGCCCGG ACATCGAGTA CGCGGTGTTG
GAGCGGGACG GGCAGCGCTA CGTGCTGGGC GCCGCCCGGG TCGCCGCGTA CGCCAAGGAG
CTGGAGGGGT ACCAGCAGGT CGGCACCGTG TACGGCCGGG ACCTGGTCGG GCGCCGATAC
ACCCCGCTGT ACGACTTCCT GGTCGAGCCG GCGGGTGAGC ACGCGTACCA GGTGCTCGGC
GCGGACTTCG TGACCACCGA GGACGGCACC GGGATCGTGC ACCTGGCGCC GGCGTTCGGC
GAGGACGACC AGAACACCTG TAACGCCGCC GGCATACCGA CTGTCGTCAC CGTGGACGAA
CGTACCCGGT TCACCGCGCT GGTCCCGCCG TACCAGGGTG AGCAGGTCTT CGACGTCAAC
AAGCCGGTGA TCCGGGAGCT GAAGGAGCGT GGCGTGGTGC TCCGGCAGGA CACCTACACC
CACGCGTACC CACATTGTTG GCGCTGCGAC ACCCCGCTGG TCTACAAGGC GGTGTCGTCC
TGGTTCGTCG CGGTGACCCG GTTCAAGGAT CGGATGGTCG AGCTCAACCA GCAGATCAAC
TGGACTCCGG GGCACATCAA GGACGGCTCG TTCGGCAAGT GGCTGGCCAA CGCCCGGGAC
TGGTCGATCA GCCGGAACCG GTTCTGGGGC TCGCCGATCC CGGTGTGGAG GTCCGACAAC
CCGGCCTATC CGCGGGTGGA CGTCTACGGC TCCCTCGCCG AACTGGAGCG GGACTTCGGC
GTACGCCTGA CCGACCTGCA CCGGCCGGCG GTGGACGAGC TGGTCCGTCC CAACCCGGAC
GACCCGACCG GGAAGTCCAT GATGCGCCGG GTCCCGGAGG TGCTGGACTG CTGGTTCGAG
TCCGGTGCGA TGCCGTTCGC CCAGGTGCAC TATCCGTTCG AGAACGCCGA CTGGTTTGAG
TCCCACTACC CCGGTGACTT CATCGTCGAG TACATCGGGC AGACCCGCGG CTGGTTCTAC
ACCATGCACG TGCTCGCCAC GGCGCTGTTC GACCGACCCG CCTTCCGTAA CTGCCTGAGC
CACGGCATCC TGCTCGGGTC GGATGGGCGC AAGATGTCCA AGAGCCTGCG CAACTACCCG
GACGTGTATC ACATCTTCGA CACGTACGGC TCGGACGCGA TGCGCTGGAT GCTGATGTCC
TCCCCGGTGC TGCGCGGTGG TGACATGGCG GTGAACGAGG CCGGCATCCG GGACGCGGTC
CGGCAGGTGC TGCTGCCGCT CTGGAACGTC TGGTACTTCT TCTCGCTCTA CGCCAACGCC
GACGGGCGTC AGGCGCGGCG GAGCACCACC TCGGCGCACC TGCTCGATCG GTATGTGCTG
GCGAAGACGA ACGAGCTGGT GTCGACGGTG CAGGCGCAGC TGGACGGGTA CGACATCTCC
GGTGCCTGCG TCACCGTGCG GTCCTACCTG GATGCCTTGA CCAACTGGTA CGTACGCCGC
TCGCGGGACC GGTTCTGGTC GGGCGACGAG GACGCCTTCT GCACCCTGTG GACGGTACTG
GAGACACTCT GCCGCGTGGT GGCGCCGCTG GCGCCGCTGA CGGCCGAGGA GATCTGGCGG
GGCCTGACCG GTGAGCGTTC GGTGCACCTG ACCGACTGGC CGGCGGCGGA GGAGTTCCCC
GCTGACCATG ATCTGGTCGC CGCGATGGAC GCGGTGCGGG CGGTCGCCTC GGCGGCGTTG
TCACTGCGCA AGTCGCGCGG TCTGCGGGTA CGGCTGCCCC TGTCGGTGTT GACCGTCGCC
ACGCCGGCCG CCGCCGCGCT GCGGCCCTTC GCCGACCTGG TCGCCGACGA GGTCAACGTG
AAGCGGGTCG AGTTCACCGA CGAGGTGGGC AGCTACTGCG AGCAGGTGTT GACGGTGGTG
CCGCGGGCCC TTGGCCCGCG GGTCGGCAGG GCGGTCCAGC AGGTGATCAG GGCGGTCAAG
GCCGGGGAGT GGGAGCTGGT TGACGGCGCT CCGGTCGCCG CCGGGGTCAC CCTCGCCGAG
GGCGAGTACG AGCTGCGGTT GGTCGCCGCC GACGCGGAGC AGTCGGCGCC GCTGCCCGGC
GGTGAGGGCG TGGTCGTCCT GGACACCGAG GTCACCCCGG AGTTGGCCGC CGAGGGGTTG
GCCCGGGATG TGATCCGGGT GGTGCAGCAG GCCCGCCGGG ACGCCGACCT GGATGTCTCG
GACCGGATCG TGGTCGCGCT CGCCGCATCC GAGCAGGTGT GGGCGGCGGT CTCCGCGTAC
CGCGAGGTGG TGGCCCGGGA GGTGCTGGCC GATGCGGTGG AGCTCACCCC GGGGCTGGTC
GGGTTCACCG GTGAGGTGGG CGACGGTGAG CAGGTTGTGG TGACTGTCCG TCGGGTTTAG
|
|---|
| Protein sequence | MAYPLHDPTA TGVPASPDLP AIERRVLEHW TADKTFEASI EARPASRRSA DGVVADGAPA
DNEYVFYDGP PFANGLPHYG HLFTGYVKDV VPRYQTMRGQ RVERRFGWDC HGLPAEVVAE
KQLGITSKAE ILDLGVDRFN AACRSSVLEF THDWERYVTR QARWVDFSSA YKTLNLDYME
SVLWAFKSLH DKGLVYEGFR VLAYCWRCET PLSNTETRMD DVYRDRHDPT LSVWLTLTPD
ESAPELLRGT VALGVWTTTP WTLPSNLALA VGPDIEYAVL ERDGQRYVLG AARVAAYAKE
LEGYQQVGTV YGRDLVGRRY TPLYDFLVEP AGEHAYQVLG ADFVTTEDGT GIVHLAPAFG
EDDQNTCNAA GIPTVVTVDE RTRFTALVPP YQGEQVFDVN KPVIRELKER GVVLRQDTYT
HAYPHCWRCD TPLVYKAVSS WFVAVTRFKD RMVELNQQIN WTPGHIKDGS FGKWLANARD
WSISRNRFWG SPIPVWRSDN PAYPRVDVYG SLAELERDFG VRLTDLHRPA VDELVRPNPD
DPTGKSMMRR VPEVLDCWFE SGAMPFAQVH YPFENADWFE SHYPGDFIVE YIGQTRGWFY
TMHVLATALF DRPAFRNCLS HGILLGSDGR KMSKSLRNYP DVYHIFDTYG SDAMRWMLMS
SPVLRGGDMA VNEAGIRDAV RQVLLPLWNV WYFFSLYANA DGRQARRSTT SAHLLDRYVL
AKTNELVSTV QAQLDGYDIS GACVTVRSYL DALTNWYVRR SRDRFWSGDE DAFCTLWTVL
ETLCRVVAPL APLTAEEIWR GLTGERSVHL TDWPAAEEFP ADHDLVAAMD AVRAVASAAL
SLRKSRGLRV RLPLSVLTVA TPAAAALRPF ADLVADEVNV KRVEFTDEVG SYCEQVLTVV
PRALGPRVGR AVQQVIRAVK AGEWELVDGA PVAAGVTLAE GEYELRLVAA DAEQSAPLPG
GEGVVVLDTE VTPELAAEGL ARDVIRVVQQ ARRDADLDVS DRIVVALAAS EQVWAAVSAY
REVVAREVLA DAVELTPGLV GFTGEVGDGE QVVVTVRRV
|
|---|
| |