| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3456 |
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| Symbol | hrcA |
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| ID | 5059925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3963350 |
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| End bp | 3964405 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475705 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_001160265 |
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| Protein GI | 145595968 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.213022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGACG CGCTACAGCA GGAGGGGGGA AGGATGGGTC TCGACGACCG CAAACTCGCG
GTGCTGCGCG CGATCGTCGA GGACTACGTC GCCACGCAGG AGCCCGTCGG CAGCAAGACG
TTGGTCGAAC GGCACCAACT CGGGGTCTCC CCAGCGACCG TCCGCAACGA CATGGCGGTG
CTGGAGGAGG AGGGCTACAT CCAGCAGCCG CACACCAGCG CGGGCCGGGT GCCCACCGAT
CGTGGCTATC GTCTCTTCGT GGACCGGCTG TCCCGGGTGA AGCCGCTGAC CCCAGCCGAG
CGCCGGGCGA TCGAGCGCTT CCTGGTCGGC GCGGTTGACC TCGACGACGT GGTGCACCGC
ACAGTCCGGC TGTTGGCCCA GCTGACCCGG CAGGTCGCCG TCGTGCAGTA CCCGTCGCTG
GCCCGATCCT CGGTCCGGCA CCTGGAGCTG GTGCCGATCT CCACCACCCG GCTGATGCTT
GTCATGATCG TCGACACCGG TCGGGTCGAG CAGCGGCTCG TCGAGCTACC CGGGCCGATA
CTCCCGGACG ACGTGATCGA TCTGCGTCAG CTGGTCAACG AGAAGCTGGT CGGTACCCGG
CTCGCCGACA CACCGCCGCT GGTGCAGGCG TTGGTTGACG AGGTGACCGG GGTGCTGCGT
CCGGCCATGA CCACCCTCTC CACCGTCCTG CTGGAGACGC TGGTCGAGCG GCACGAGGAG
CGCATCGCCC TCGCCGGCAC CGCCAATCTC ACCCGCGGTG GCCTGCTCGA CTTCCAGGGG
TCGTTGCGCC CCATCCTGGA GGCGCTGGAG GAGGAGGTGG TGCTCCTCAA ACTCATCGGG
GAGGTCGAGC CGAGCGCGAT GCGCGTCCGG ATCGGCGACG AGAACGAAAT CGACAATCTC
CGCGCCACCT CCGTGGTGAG TACCGGTTAC GGACCAGGGG TGACCATTCT GGGTGGCCTC
GGAGTGGTCG GGCCGACTCG GATGGATTAC CCCAGCACCA TCGCCACGGT TCGGGCCGTG
GCACGCTACG TGGGCGACCT GCTGGCCCAG AACTAG
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| Protein sequence | MADALQQEGG RMGLDDRKLA VLRAIVEDYV ATQEPVGSKT LVERHQLGVS PATVRNDMAV
LEEEGYIQQP HTSAGRVPTD RGYRLFVDRL SRVKPLTPAE RRAIERFLVG AVDLDDVVHR
TVRLLAQLTR QVAVVQYPSL ARSSVRHLEL VPISTTRLML VMIVDTGRVE QRLVELPGPI
LPDDVIDLRQ LVNEKLVGTR LADTPPLVQA LVDEVTGVLR PAMTTLSTVL LETLVERHEE
RIALAGTANL TRGGLLDFQG SLRPILEALE EEVVLLKLIG EVEPSAMRVR IGDENEIDNL
RATSVVSTGY GPGVTILGGL GVVGPTRMDY PSTIATVRAV ARYVGDLLAQ N
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