Gene Strop_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3452 
Symbol 
ID5059921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3959209 
End bp3959682 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content69% 
IMG OID640475701 
Productputative metalloprotease 
Protein accessionYP_001160261 
Protein GI145595964 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.90902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.113177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCATCG AGATTGCCAA CGAGTCCGGG GCCGACGTCG ACACCGACGC GGTGCTCGCC 
GTTGCCCGGC ACGCCCTCGA CGAAATGGGG GTCAATCAGC TCGCCGAGCT GTCCGTGCTG
CTTGTCGATA TCGACTACAT GGCCGAGTTG AACCACCGCT GGATGGGCGG GGACGGCCCC
ACCGATGTCC TCGCCTTCCC GATGGACGAG GGCAGCGTTG ACCACGGTCC GGGGGAGAAC
GCCGCCGCCG GCGCCGAGCC GGCGTTGCTC GGTGACATCG TGCTCTGCCC CGAGGTGGCC
GCGAAGCAGG CGGTCACCGC AGGTCACTCC ACCGCCGACG AGCTGCATCT ACTCACCGTG
CACGGGGTGC TGCACCTGCT CGGCTACGAC CACGCGGAGC CGGAGGAGGA ACGGGAGATG
TTCGCCCTCC AAGCCCGGCT GCTGGCGAGT TGGCGGTCGA CCCGGTCACG ATGA
 
Protein sequence
MSIEIANESG ADVDTDAVLA VARHALDEMG VNQLAELSVL LVDIDYMAEL NHRWMGGDGP 
TDVLAFPMDE GSVDHGPGEN AAAGAEPALL GDIVLCPEVA AKQAVTAGHS TADELHLLTV
HGVLHLLGYD HAEPEEEREM FALQARLLAS WRSTRSR