Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3452 |
Symbol | |
ID | 5059921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3959209 |
End bp | 3959682 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640475701 |
Product | putative metalloprotease |
Protein accession | YP_001160261 |
Protein GI | 145595964 |
COG category | [R] General function prediction only |
COG ID | [COG0319] Predicted metal-dependent hydrolase |
TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.90902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.113177 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCATCG AGATTGCCAA CGAGTCCGGG GCCGACGTCG ACACCGACGC GGTGCTCGCC GTTGCCCGGC ACGCCCTCGA CGAAATGGGG GTCAATCAGC TCGCCGAGCT GTCCGTGCTG CTTGTCGATA TCGACTACAT GGCCGAGTTG AACCACCGCT GGATGGGCGG GGACGGCCCC ACCGATGTCC TCGCCTTCCC GATGGACGAG GGCAGCGTTG ACCACGGTCC GGGGGAGAAC GCCGCCGCCG GCGCCGAGCC GGCGTTGCTC GGTGACATCG TGCTCTGCCC CGAGGTGGCC GCGAAGCAGG CGGTCACCGC AGGTCACTCC ACCGCCGACG AGCTGCATCT ACTCACCGTG CACGGGGTGC TGCACCTGCT CGGCTACGAC CACGCGGAGC CGGAGGAGGA ACGGGAGATG TTCGCCCTCC AAGCCCGGCT GCTGGCGAGT TGGCGGTCGA CCCGGTCACG ATGA
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Protein sequence | MSIEIANESG ADVDTDAVLA VARHALDEMG VNQLAELSVL LVDIDYMAEL NHRWMGGDGP TDVLAFPMDE GSVDHGPGEN AAAGAEPALL GDIVLCPEVA AKQAVTAGHS TADELHLLTV HGVLHLLGYD HAEPEEEREM FALQARLLAS WRSTRSR
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