Gene Strop_3449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3449 
Symbolera 
ID5059918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3956552 
End bp3957451 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content68% 
IMG OID640475698 
ProductGTP-binding protein Era 
Protein accessionYP_001160258 
Protein GI145595961 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0196733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTCCG AGAACCTTCG GCAGCCGTAC CGGGCGGGCT TTGGCTGCTT TGTGGGGCGG 
CCAAACGCTG GCAAGTCGAC GCTGACCAAC GCGATCGTCG GGCAGAAGAT CGCCATCACG
TCGAGCAAGC CGCAGACAAC CCGGCACGTC ATCCGGGCGG TGCTGCACCG GCCCGACTCG
CAGCTCGTGC TGGTCGACAC GCCGGGGCTG CACCGGCCCC GGACGCTACT CGGCGAGCGC
CTCAACGATC TGGTGCGGCA GACGTGGAGC GAGGTTGACG TGATCGGCCT CTGCGTCCCG
GCGGACGAGC CGATCGGCCG GGGTGACCGC TTCATCTCCG GTGAGCTGGC CGAGCTGAAT
GCGACCGTGC TCGCCGTGGT CACCAAGACT GACCTGGTCG ACCGCGAGCA GCTGGCCAAG
CAGTTGGTCG CGGTGAGTGA ACTGGCGGAC TTCGCGGAAG TCGTGCCGGT CAGCGCGGTC
TCGGGGCACC AGGTCGACAC GCTGGTGGAC GTGATGACCC GCTACCTGCC GGAGTCACCG
CAGCTCTACC CGGACGACAT GCTCACCGAA GAACCGGAGC AGGTGCTGGT CGCCGAGCTG
ATCCGGGAGG CGGCGCTGGA GGGTGTGCGC GACGAGCTCC CTCACTCCAT CGCCGTGGTG
GTGGAGGAGA TGATCCCCGA GGAACGGGTC ATGAAGATCT ACGCCGACGT GTACGTCGAG
CGGCCGAGCC AGAAGGCGAT CGTGATCGGG CACCGGGCCA GCCGGCTCCG GGACGTCGGC
ATCCGGGCGC GGCGGCAGAT CGAGGAGCTG CTCGGCACCC GGGTCTACCT CGACCTGCAC
GTCCGGGTGG CGAAGGACTG GCAGCGGGAC CCGAAGCAGC TCCGTAAGCT CGGCTTCTAG
 
Protein sequence
MTSENLRQPY RAGFGCFVGR PNAGKSTLTN AIVGQKIAIT SSKPQTTRHV IRAVLHRPDS 
QLVLVDTPGL HRPRTLLGER LNDLVRQTWS EVDVIGLCVP ADEPIGRGDR FISGELAELN
ATVLAVVTKT DLVDREQLAK QLVAVSELAD FAEVVPVSAV SGHQVDTLVD VMTRYLPESP
QLYPDDMLTE EPEQVLVAEL IREAALEGVR DELPHSIAVV VEEMIPEERV MKIYADVYVE
RPSQKAIVIG HRASRLRDVG IRARRQIEEL LGTRVYLDLH VRVAKDWQRD PKQLRKLGF