Gene Strop_3415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3415 
Symbol 
ID5059882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3919181 
End bp3920548 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content64% 
IMG OID640475662 
Producthypothetical protein 
Protein accessionYP_001160224 
Protein GI145595927 
COG category 
COG ID 
TIGRFAM ID[TIGR01376] Chlamydial polymorphic outer membrane protein repeat 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.253351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAGC ACCACGACCA CGAACCAGAT AGGCCCGGTG GACGCCGAGC GAGGTCACGG 
TGGTGGGCCG TCGGACTGGC CGGTATGACC GGCCTGGCCC TCACCACCAG CCTCAGCATC
GGCGGCGCGC CGGCTATCGG CGCCGTCGAC GGCACTGTCA CCGCCGCCGA CGACGACCGG
CCAGGAAGAC CTGACCACGC CTCCACCAAC ACCAAGGACC ACAAGGGCAA GGGAACGAAG
GACAAACGCA AGGGCACACC GGTCCCGTGT GACGCCGATG CGCTGATCGC GGCGATCACC
CTGGCCAACG CCCGCGGCGG TGCCGTCCTC GACCTTGCCG GCAAGTGCAC CTACCTGCTT
ACCGCCGACA TCGACGACGG TGCCGGCCTG CCCGCCATCA CCGCCCCGAT CACCCTCAAC
GGCGGCAAGG ACACCACCAT CACACGCGCC GCCGCCGCTG AACCGTTCAG AATCCTCACC
GTCGACACGG ACGGCGACCT CACCCTCAAC AAGCTGAAAA TCACCGGTGG ACAGACCGCT
GCCGACGAGG ACGGGGGAGG GATCCTGGTC AACATCGGCG GAAAGTTGAT CATCGGCTAC
AGTGCCATCA CCCGTAACAT CGCCAGCGAC AACGGCGGCG GGATCGCCAA CAACGGCACT
GCCATTGTCA GTAACTCCAC CGTCAGCCAC AACACAGCTG GTTCAATTGG CGGTGGTGTC
GTCAGCGTCG GCGTACTCGA CATCAGGGCG TCCCACGTGT CCGCCAATAC CGCCCTCGCC
GGAGCGGCTG GGGTGTTCAG CGGGGGCACA ACCCGGATCA AGCGGAGTAC CATTACCGCC
AACCATGCCC AGGTGGGAAA TGTTGGCGGC CTTGTCGTCC TTGGAACCGG CACCGTTTCG
GATACCCGGA TCACGAACAA TACCGCCCCG GAGGGTGGCG GCGTCGTTTT GGGGTCCGGT
GGACAACTCA CACTCAGATC CGTAACCATC GCCGGAAACA CGGCTAGGAC GGGTCGTTCT
GGTGGCCTAG GAATTGACCC AAACGCATCA GTTGTTGTCG AGGACAGCAT CATCAAAAAC
AATGACGCCA TCGACGGCGG CGGTATCTAC AGCTTCGCCG AGGTGGTGTT ACGGCGCACG
GTGCTTACCG GTAACCAGGC AGGCAACGAG GGTGGCGGCA TCTACAACAC TTCCGACGGC
GAGATCAACC TCTTCTCAAC AAAGATCATG AAAAACGTTG CCATCACCGA CGGCGGCGGG
ATCTTCAACC AGGCGGGCGG GACGGTCGAG TTGAATACCG CCACCGGCAC CACCGTGGTC
AAGAACCGGC CGAACAACTG CGTCAACGTC ACCGGCTGCC CGGGCTGA
 
Protein sequence
MDQHHDHEPD RPGGRRARSR WWAVGLAGMT GLALTTSLSI GGAPAIGAVD GTVTAADDDR 
PGRPDHASTN TKDHKGKGTK DKRKGTPVPC DADALIAAIT LANARGGAVL DLAGKCTYLL
TADIDDGAGL PAITAPITLN GGKDTTITRA AAAEPFRILT VDTDGDLTLN KLKITGGQTA
ADEDGGGILV NIGGKLIIGY SAITRNIASD NGGGIANNGT AIVSNSTVSH NTAGSIGGGV
VSVGVLDIRA SHVSANTALA GAAGVFSGGT TRIKRSTITA NHAQVGNVGG LVVLGTGTVS
DTRITNNTAP EGGGVVLGSG GQLTLRSVTI AGNTARTGRS GGLGIDPNAS VVVEDSIIKN
NDAIDGGGIY SFAEVVLRRT VLTGNQAGNE GGGIYNTSDG EINLFSTKIM KNVAITDGGG
IFNQAGGTVE LNTATGTTVV KNRPNNCVNV TGCPG