Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3415 |
Symbol | |
ID | 5059882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3919181 |
End bp | 3920548 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640475662 |
Product | hypothetical protein |
Protein accession | YP_001160224 |
Protein GI | 145595927 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.253351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCAGC ACCACGACCA CGAACCAGAT AGGCCCGGTG GACGCCGAGC GAGGTCACGG TGGTGGGCCG TCGGACTGGC CGGTATGACC GGCCTGGCCC TCACCACCAG CCTCAGCATC GGCGGCGCGC CGGCTATCGG CGCCGTCGAC GGCACTGTCA CCGCCGCCGA CGACGACCGG CCAGGAAGAC CTGACCACGC CTCCACCAAC ACCAAGGACC ACAAGGGCAA GGGAACGAAG GACAAACGCA AGGGCACACC GGTCCCGTGT GACGCCGATG CGCTGATCGC GGCGATCACC CTGGCCAACG CCCGCGGCGG TGCCGTCCTC GACCTTGCCG GCAAGTGCAC CTACCTGCTT ACCGCCGACA TCGACGACGG TGCCGGCCTG CCCGCCATCA CCGCCCCGAT CACCCTCAAC GGCGGCAAGG ACACCACCAT CACACGCGCC GCCGCCGCTG AACCGTTCAG AATCCTCACC GTCGACACGG ACGGCGACCT CACCCTCAAC AAGCTGAAAA TCACCGGTGG ACAGACCGCT GCCGACGAGG ACGGGGGAGG GATCCTGGTC AACATCGGCG GAAAGTTGAT CATCGGCTAC AGTGCCATCA CCCGTAACAT CGCCAGCGAC AACGGCGGCG GGATCGCCAA CAACGGCACT GCCATTGTCA GTAACTCCAC CGTCAGCCAC AACACAGCTG GTTCAATTGG CGGTGGTGTC GTCAGCGTCG GCGTACTCGA CATCAGGGCG TCCCACGTGT CCGCCAATAC CGCCCTCGCC GGAGCGGCTG GGGTGTTCAG CGGGGGCACA ACCCGGATCA AGCGGAGTAC CATTACCGCC AACCATGCCC AGGTGGGAAA TGTTGGCGGC CTTGTCGTCC TTGGAACCGG CACCGTTTCG GATACCCGGA TCACGAACAA TACCGCCCCG GAGGGTGGCG GCGTCGTTTT GGGGTCCGGT GGACAACTCA CACTCAGATC CGTAACCATC GCCGGAAACA CGGCTAGGAC GGGTCGTTCT GGTGGCCTAG GAATTGACCC AAACGCATCA GTTGTTGTCG AGGACAGCAT CATCAAAAAC AATGACGCCA TCGACGGCGG CGGTATCTAC AGCTTCGCCG AGGTGGTGTT ACGGCGCACG GTGCTTACCG GTAACCAGGC AGGCAACGAG GGTGGCGGCA TCTACAACAC TTCCGACGGC GAGATCAACC TCTTCTCAAC AAAGATCATG AAAAACGTTG CCATCACCGA CGGCGGCGGG ATCTTCAACC AGGCGGGCGG GACGGTCGAG TTGAATACCG CCACCGGCAC CACCGTGGTC AAGAACCGGC CGAACAACTG CGTCAACGTC ACCGGCTGCC CGGGCTGA
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Protein sequence | MDQHHDHEPD RPGGRRARSR WWAVGLAGMT GLALTTSLSI GGAPAIGAVD GTVTAADDDR PGRPDHASTN TKDHKGKGTK DKRKGTPVPC DADALIAAIT LANARGGAVL DLAGKCTYLL TADIDDGAGL PAITAPITLN GGKDTTITRA AAAEPFRILT VDTDGDLTLN KLKITGGQTA ADEDGGGILV NIGGKLIIGY SAITRNIASD NGGGIANNGT AIVSNSTVSH NTAGSIGGGV VSVGVLDIRA SHVSANTALA GAAGVFSGGT TRIKRSTITA NHAQVGNVGG LVVLGTGTVS DTRITNNTAP EGGGVVLGSG GQLTLRSVTI AGNTARTGRS GGLGIDPNAS VVVEDSIIKN NDAIDGGGIY SFAEVVLRRT VLTGNQAGNE GGGIYNTSDG EINLFSTKIM KNVAITDGGG IFNQAGGTVE LNTATGTTVV KNRPNNCVNV TGCPG
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