| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3408 |
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| Symbol | |
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| ID | 5059875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3912499 |
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| End bp | 3913884 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640475656 |
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| Product | polymorphic outer membrane protein |
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| Protein accession | YP_001160218 |
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| Protein GI | 145595921 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATC TACACCACGA ACCAGAACCG GATCACGCCA GCAGGCGCCG GACACCGTCA
CGATGGTGGG CCGCCGGGCT CGCCGGGATG ACAGGCCTTG CCCTCACCAC CGTCGGAGTC
GCCACCCCCG CCGCCGCCGA CGGCGCAGTC GGGCACGCCC TCGCCGCCCC CGACGACCGG
CCCTCCGCTG ACGGCCACCG CGACGAGGGT ACGGGCGACG GTAAGAGTAA GGGCAAGAAG
GAGATCAAGC CCAGGGGTAT CCCCGTACCT TGCGACGCCG ACGCCCTGAT CGCCGCGATC
ACCCTGGCCA ACGCCCGCGA CGGCGCAGTG CTCGACCTCG CCGAGGACTG CACCTACCTG
CTCACGGCTG CCATCGACAG CAGCGGCCTG CCCGCCATCA CTGCCCCCAT CACCCTCAAC
GGCGGCAAGA ACACCACCAT CGAACGCGCC GCCGCCGCCG ACCCGTTCCG TATCCTCGCC
GTCGAGGTCG GCGGCGACCT TACCGTGAAC AAATTGAAGA TCGCCGGGGG GCGGGCCGCC
GCCTCGGGTG AGTTCGGGGC TGGCATCCTC GTGAACCCCG GCGGGCGGCT GACTGTCAAA
CACAGCGAAA TCGTCCGCAA TGTCGGCGGC ACCAGCGTCG GGGGCGGCAT CGCCAACCTT
GGCACCAGTG CCATCACCGA CTCCGTTATC AGTCGCAACA GCGCCGCACA GGGTGGCGGT
ATATTCAGCA TAAGGGGGCG GCTCACCGTC AAGAAGGTTC GATTTACCGA CAATAGCGCT
AACAGCGTCG GTGGTGCTAT TGGCAGTGTT CTCGACGTGA CCACCGAGGT GTGGGACAGC
ACCTTTGCCC GTAACCGTGC AGAGATCGGT GCGGGAATCG GCGAATCCGA GGGTGCCAAT
ACCAGCATCG TCAGGTCCAC CTTCGTAGAT AACAATTCCA GTAGTATTGG TGGCGCTATC
TTCCTCGACG GGCAGCTGAC CATGCGACAC GTCACCGTAG TCAGAAACCA CGCCGAAGAA
CGGGGTGGCG GCGTCGCTGT CCAGAACGCC ACGGGTGGTT CTGCCGCCGT CATCGAAGAC
AGTGAGATCA GCAAAAACAC CACCAACGGT ACCGGGGGAG GAATTTTCAA TGCGTCCGTA
CCGGTGGTAC TGCGGGACAC CACGGTAGCG GCTAATCAGG CCGACACGGG TGGCGGCATT
TTCACCCAGG CCAACAGTAC GACCACCCTG TTCAACACCT CGGTCGTCAA GAATATCGCT
GTCACCGACG GCGGCGGAAT TTTCAACGAC CCCGCCGGCG TAGTGGTCCT GAACACGGCC
ACCGGCACGG TCGTTATCAA GAACCGGCCG AACAACTGCG TCAACGTCCC CGGCTGTTCG
GGCTGA
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| Protein sequence | MSHLHHEPEP DHASRRRTPS RWWAAGLAGM TGLALTTVGV ATPAAADGAV GHALAAPDDR
PSADGHRDEG TGDGKSKGKK EIKPRGIPVP CDADALIAAI TLANARDGAV LDLAEDCTYL
LTAAIDSSGL PAITAPITLN GGKNTTIERA AAADPFRILA VEVGGDLTVN KLKIAGGRAA
ASGEFGAGIL VNPGGRLTVK HSEIVRNVGG TSVGGGIANL GTSAITDSVI SRNSAAQGGG
IFSIRGRLTV KKVRFTDNSA NSVGGAIGSV LDVTTEVWDS TFARNRAEIG AGIGESEGAN
TSIVRSTFVD NNSSSIGGAI FLDGQLTMRH VTVVRNHAEE RGGGVAVQNA TGGSAAVIED
SEISKNTTNG TGGGIFNASV PVVLRDTTVA ANQADTGGGI FTQANSTTTL FNTSVVKNIA
VTDGGGIFND PAGVVVLNTA TGTVVIKNRP NNCVNVPGCS G
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