Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3404 |
Symbol | |
ID | 5059871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3907354 |
End bp | 3908001 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640475652 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001160214 |
Protein GI | 145595917 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCAC TCGTCGTAGG CGGCAAACCC TGTTGCCGAT ATGGCAAAAT ATTGACCATG GACGGTGACC TGAACCAGGC TCTCGACGCG GTCGGCCCCC GGCTGCGGGC ACTGCGACAC AAGCGCGCAA CCACTCTGAC CGACCTCTCG GCCCAGACCG GCATCTCGGT GAGCACCCTG TCCCGGCTCG AATCAGGCAC TCGCCGGCCG ACCCTCGAGC TGCTCCTTCC CCTCGCCCGC GCCCACGGCG TCACCCTCGA CGAACTCGTC GGGGCGCCAC CCACCGGCGA CCCCCGCATC CACCTGCGCC CAGTCATCCG CCACGACATG ACCGTGCTGC CGTTGACCCG AGGAGCCGGC GGCATCCAGG CATTCAAGCT GATCATCCCG ACCAGCAAGC GGGAGCCAGA CCCACAGACC CACGACGGGT ACGAGTGGCT CTACGTGTTG AGCGGGCGGT TACGGCTCAT CCTCGGCGAG CACGATCTCG TGCTGACGCC CGGCGAGGCG GCCGAGTTCG ACACCCGGGT GCCGCACTGG TTCGGCGTCG CCGAGGACCA GCCGGTCGAG ATCCTCAGCC TCTTCGGCCA GCAGGGAGAG CGTGCCCACC TCCGCGCGCG GCCCAAGGCC CGGCCACCAT CGGATTGA
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Protein sequence | MPPLVVGGKP CCRYGKILTM DGDLNQALDA VGPRLRALRH KRATTLTDLS AQTGISVSTL SRLESGTRRP TLELLLPLAR AHGVTLDELV GAPPTGDPRI HLRPVIRHDM TVLPLTRGAG GIQAFKLIIP TSKREPDPQT HDGYEWLYVL SGRLRLILGE HDLVLTPGEA AEFDTRVPHW FGVAEDQPVE ILSLFGQQGE RAHLRARPKA RPPSD
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