Gene Strop_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3310 
Symbol 
ID5059775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3797560 
End bp3798558 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content67% 
IMG OID640475558 
Productaldo/keto reductase 
Protein accessionYP_001160122 
Protein GI145595825 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID[TIGR01293] voltage-dependent potassium channel beta subunit, animal 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.108449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.323857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCC GACACCTGGG CCGTTCCGGC CTGATGGTCA GCGAGATCTC TTACGGAAAC 
TGGATCACCC ACGGCTCCCA GGTTGAGGAG GAGTCGGCCT TCGCCTGTGT CCGGGCGGCC
CTGGACGCCG GTATCACCAC GTTCGACACC GCGGACGCGT ACGCGGGCAC CCGCGCGGAG
GAGGTCCTCG GTCGGGCACT GAAAAACGAA CGGCGCGCCG GATTCGAGCT GTTCACGAAG
GTGTACTGGC CGACCGGTCC GGGTCGCAAC GACCGTGGCC TGTCCCGTAA GCACATCATG
GAGTCGATCG ACGGCTCGCT GCGCCGGCTG GGCACCGACT ATGTCGACCT CTACCAGGCA
CACCGGTATG ACCACAGCAC CCCGATCGAA GAGACGATGG AGGCGTTCGC CGACGTTGTC
CGCTCGGGGA AAGCCCTCTA CATCGGGGTC TCCGAGTGGA CGGCGACGCA GCTGCGCCAG
GCCCACCAGC TCGCCCGTGA GCTGCGGATT CCACTGATCT CCAACCAACC GCAGTACTCG
ATGCTCTGGC GGGTCATCGA GACCGAGGTG GTGCCGGCGA GCGAGGAGTT GGGCGTCGGT
CAGATCGTCT GGTCCCCGAT GGCCCAGGGT GTGCTGTCCG GCAAGTACCA GCCGGGCCAC
CCCCCACCCA TCGGCTCCCG GGCCACCGAC GAGAAGTCGG GCGCGCACTT CATCGCCAAG
TGGCTCAGCG ACGACGTGTT GACCCGGGTG CAGCACCTCA AGCCGCTCGC CGAGCAGGCG
GGGCTGAACA TGGCCCAGCT CGCCATCGCC TGGGTGCTCC AAAACCCGAA CGTCTCTTCG
GCGATCATCG GTGCCTCCCG CCCCGAGCAG GTACACGACA ACGTCAAGGC GGCCGGGGTA
CGGCTCGATG CCGACCTACT CAAGGCGATC GACGACATCG TCGAGCCGAT CGTCGAGCGG
GACCCGGCCC GGACCGAGTC CCCCGCGCAG CGGCCCTGA
 
Protein sequence
MEFRHLGRSG LMVSEISYGN WITHGSQVEE ESAFACVRAA LDAGITTFDT ADAYAGTRAE 
EVLGRALKNE RRAGFELFTK VYWPTGPGRN DRGLSRKHIM ESIDGSLRRL GTDYVDLYQA
HRYDHSTPIE ETMEAFADVV RSGKALYIGV SEWTATQLRQ AHQLARELRI PLISNQPQYS
MLWRVIETEV VPASEELGVG QIVWSPMAQG VLSGKYQPGH PPPIGSRATD EKSGAHFIAK
WLSDDVLTRV QHLKPLAEQA GLNMAQLAIA WVLQNPNVSS AIIGASRPEQ VHDNVKAAGV
RLDADLLKAI DDIVEPIVER DPARTESPAQ RP