Gene Strop_3280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3280 
Symbol 
ID5059745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3763584 
End bp3764393 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content68% 
IMG OID640475528 
Producthypothetical protein 
Protein accessionYP_001160092 
Protein GI145595795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.900267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACGGC CGGACTGGGC ACCCGACGAC ATCGACATCG AGCGTCCCAG CGTCGCCCGC 
ATGTACGACT ACTACCTCGG CGGCTCCCAC AACTTTGCGG TGGACCGAGC AGCGGCGCAG
GCTATGGTCG CGGCCGTTCC CGAGGCCCCA CTGATGGCCC AGGCGAACCG CGCCTTCCTG
CGCCGGGCGG TGCACTTCCT GGCCGATGCC GGAGTCCGGC AGTTCCTTGA CATCGGCTCA
GGAATCCCCA CTGTCGGCAA CGTGCACGAG ATCGCCCGGC AGGTCGCGCC GGACTCCCGG
GTCGTCTATG TCGACACCGA CCCGGTGGCG GTGGCACACA GCCAGGAGAT TCTCGCTGAC
AACGACCAGG CAACCGTGGT GCAGGAGGAC CTACGGCGCC CCGACCGAAT CCTCAGCCAC
CCCGAGCTCC GTCGGCTACT CGACCTCAAC CAGCCGATCG CGGTGCTCAT CGTCGCCGTG
CTGCACTTCA TCCCCGACCA CGACCGCCCC GCCGAGCTGC TGCGGACCCT GCGTGATGCC
CTCGCCCCCG GAAGCTGGCT GGTGCTGTCG CAGGCCAGCG ACGAAGGGCG GCAGGACACC
GAGCGGAGCG ATGCCGAGGC GGTGTACCGA CGCACCGGCA GTCCACTGTG GTTTCGGAGC
CGATCCGAAC TAGCCACCCT CTTCGACGGC TTCGAGTTGG TCGAGCCCGG GGTGGTGTGG
GTTCCACAGT GGCACCCGGA GACACCGGAG AGCAGTGTGA ACGCCGAGAC AACGGCGTTC
CTCGGTGGCG TGGGGCGGAT CGGTGGCTAG
 
Protein sequence
MVRPDWAPDD IDIERPSVAR MYDYYLGGSH NFAVDRAAAQ AMVAAVPEAP LMAQANRAFL 
RRAVHFLADA GVRQFLDIGS GIPTVGNVHE IARQVAPDSR VVYVDTDPVA VAHSQEILAD
NDQATVVQED LRRPDRILSH PELRRLLDLN QPIAVLIVAV LHFIPDHDRP AELLRTLRDA
LAPGSWLVLS QASDEGRQDT ERSDAEAVYR RTGSPLWFRS RSELATLFDG FELVEPGVVW
VPQWHPETPE SSVNAETTAF LGGVGRIGG