Gene Strop_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3238 
Symbol 
ID5059703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3711788 
End bp3712558 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content76% 
IMG OID640475486 
Productmethyltransferase type 11 
Protein accessionYP_001160050 
Protein GI145595753 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0679284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0358471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGACTA GGCTGGTCGA GGTGGAGCAG ACCCGAGGGC GGCTCGCTGG CCCGCCGTTG 
ACCCCGCGTA CCGCCGTCAT CTGGTCGGTG CTGCGCGCCG AACTGGACCG CCGTGCCGAC
ACCGACCTGA CCGTGCTCGA CGTGGGTGGG GGCACCGGCG GCTTCGCTGT CCCGCTGGCC
CAGGCTGGGC ACCGGGTGAC CGTCGTGGAC GCCAACCCCG ACGCGCTCGC CGCGCTGACC
CGCCGCGCTG CCGACGCCGG CGTCGCCGAC CGGGTGCGCG CGGTGCAGGG CGACGGTGAC
GCGCTCGCCG GGCTCGTGGA ACCGGCCAGC GTGGACCTGG TGCTCTGCCA CGCCGTCCTG
GAGGTGGTTG ACGACCCGGT GGCGGTTGTC GCTGCACTGG CCGGCGCGCT GCGCCCCGGC
GGGGCGGCGA GCGTGCTGGT CGCCGGGCGG GCCGCCGCCG TGCTCAGTCG GGCCATGACC
GGCCAGTTGG ATGTTGCGGG GCTGCTCGCT GCCGACTCCG CCGGAACCGC CGGTCCCCGG
GACACTCTGC GGCGGCGCTT CGCCGCCGAC GAGGCGGCAG CGCTGCTCGC GGCCGCGGGT
CTGGAGGTCG AGGAGCTCCA TGGGGTCCGC GTTCTCACCG ACCTGCTGCC CGCCGCGGTC
GGCGACGGCC AGCCCGCCGC CCTGCTGGAG TTGGAGCTGG CGCTTGCCGC CCAACCGCCC
TGGCGGGACC TCGCCGCCCA GCTGCACCTG TTCGCCCGTC GGCGAGCATG A
 
Protein sequence
MVTRLVEVEQ TRGRLAGPPL TPRTAVIWSV LRAELDRRAD TDLTVLDVGG GTGGFAVPLA 
QAGHRVTVVD ANPDALAALT RRAADAGVAD RVRAVQGDGD ALAGLVEPAS VDLVLCHAVL
EVVDDPVAVV AALAGALRPG GAASVLVAGR AAAVLSRAMT GQLDVAGLLA ADSAGTAGPR
DTLRRRFAAD EAAALLAAAG LEVEELHGVR VLTDLLPAAV GDGQPAALLE LELALAAQPP
WRDLAAQLHL FARRRA