Gene Strop_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3223 
Symbol 
ID5059688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3693204 
End bp3693926 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content72% 
IMG OID640475471 
Productglutamine amidotransferase 
Protein accessionYP_001160035 
Protein GI145595738 
COG category[R] General function prediction only 
COG ID[COG3442] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0176125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCTCTG ACAGCCTGCG CATCGTCTGG GTCTACCCGG ATCTGCTCTC CACCTACGGT 
GACCGGGGCA ACGCACTCAT CCTGGCCAGC CGCGCCCAGC GGCGCGGCTA CCCGGTCGAG
GTGCTGGAGG TCCGCTCCGA CCAACCACTG CCCGCTACCG CCGACATCTA TCTGGTCGGC
GGCGGCGAAG ACGGTCCCCA GGCGCTCGGC GCGCAGCGGC TCATCGCCGA CGGCGGCCTA
CACCGCGCCG TCGCACAGGG CTCGGTGGTG TTCGGCGTCT GCGCCGGCTA CCAGCTCCTC
GGCTCCTCGT TCTTCGCCAA GGGCACCAAG TACGCCGGCC TGGAACTGCT GGACCTCTCC
TCCGACCGGG GCCCCACCCG CGCCATCGGC GAACTGGCCG GCACCATCGA CCCACGGCTG
GGGCTGCCGC CCCTGTCCGG CTTCGAGAAC CACGGTGGGC GTACCCGCCT CGGCTCCGAG
GTGTCGCCGC TGGCCCAGTT GACCGCCGGA ATCGGCAACG ACACCCGGAC CGAAGGGGCC
TGGCGGGGCA AGCTGCTCGG CACCTACTCG CACGGACCAG CCCTGGCTCG TAACCCGGCC
CTGGCCGATC TGCTGCTGCG CTGGGCGGTC GGCGTCAACC AGCTCCCCCC GCTGGACGAC
ACCTGGTCGG AACGGCTCCG CGCCGAGCGC CACGCCGCAG TGGCCGCCGC CGCCCGACCG
TGA
 
Protein sequence
MFSDSLRIVW VYPDLLSTYG DRGNALILAS RAQRRGYPVE VLEVRSDQPL PATADIYLVG 
GGEDGPQALG AQRLIADGGL HRAVAQGSVV FGVCAGYQLL GSSFFAKGTK YAGLELLDLS
SDRGPTRAIG ELAGTIDPRL GLPPLSGFEN HGGRTRLGSE VSPLAQLTAG IGNDTRTEGA
WRGKLLGTYS HGPALARNPA LADLLLRWAV GVNQLPPLDD TWSERLRAER HAAVAAAARP