| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3217 |
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| Symbol | |
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| ID | 5059682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3685496 |
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| End bp | 3687040 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640475465 |
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| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
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| Protein accession | YP_001160029 |
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| Protein GI | 145595732 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0515393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGGCA ATCCTCGCCC TCGTAGCGTG ACCGGAATCC GGCTCGGTAA CCTCGCCGCT
CGGCTCGCCG CCGAGTCCGG TGCGGACGCC GTTGACCTTC GGCCCGGTCC AACGGAACCG
ACAGTCACCG GGGTGACGCA CGCCAGCCAG GAGGTCCGCC CCGGTGACCT GTACGCGGCC
CTGCCCGGTG CCCGGCGGCA CGGCGCCGAG TTCGTCTCGG CCGCGGCCCG AGCCGGTGCG
GTGGCCGTGC TGACCGATCC GGATGGCGCG GCGGCGACCG CGGAAGTCGA TCTTCCCATG
CTGGTGGTGC CGGACCCGCG GGCGGTACTG GGTGACCTCG CCAGTGTGGT GTACGGCGAT
CCGACCGCCG GGTTGACGGT GATCGGGGTG ACCGGAACCG CGGGCAAGAC CTCCACGGCG
TACCTGGTCG AGTCGGGGCT GCGAGCGGCC GGGCACACCA CCGGTCTGAT CGGCACCGTG
GAGACCCGGC TCGGTGATCT GGTGGTCGAC AGCGTCCGGA CCACCCCCGA GGCGACCGAC
CTGCACGCCA TGCTCGCCGC TGCCCGAGAG CGCGGCGTCA CCGCCGTGGT CATGGAGGTG
TCCAGCCACG CGCTGGCCAT GGGGCGGGTC GGTGGCGTCC GGTTCACCGT CGGCGGCTAT
ACCAACTTCG GCTCCGACCA CCTCGACTTC CACGCCGACT CCGTGGACTA CTTCGCCGCC
AAGGCGAAGC TCTTCGACGG CCGCTGCGAG GTGGAGGTGC TCAACCACGA CGACCCGGCG
CTGCTTCCGT TGCATCGACC CGCCACCGTC ACCTACTCCG CGGCCGGCGA CGGCGCCGCC
ACCTGGTGGG CCGACGAGGC CGGTGGCGAG GGGTACGCGC AGCGCTTCAC CCTGCACGGC
CCGGACGGGC TGACCCTGCC CGCCGGGGTG GCCCTACCCG GTCGGCACAA CGTCGCCAAC
GCGCTGCTCG CCGTCGCCGT ACTGGTGGCG GCCGGGGTGG CGCCGCGGAC CGCCGTCGCG
GGGGTGGCCG ACTGCGGCGG CGTTCCCGGT CGGCTGGAGC TGGTGCCGTC CCCCGGCCCG
GTGCGCGGCG TCGTCGACTA CGCGCACAAG ACCGATGCGA TCGTTGCCGC GCTGGCCGCC
CTGCGGGAGT TCAGCACCGG GCGGCTCATC TGCCTACTCG GCGCCGGCGG CGACCGGGAC
CGGGGCAAGC GGCCCCTGAT GGGTGTCGCC GCCGCGGAGG GCGCGGACGT GGTGCTGGTG
ACCGACGACA ACCCGCGGAC CGAGGATCCC GCCGACATCC GTGCCGAGGT GCTCGCCGGC
GTGCGTCGGG CCGACACCGA GGCGCAGGTC CTGGAGGTAC CCGGTCGGCG TGCGGCCATC
GCGGAGGCGG TCCAGCTCGC TGCGCCCGGG GACGTGGTGG CGCTGTTGGG CAAGGGGCAC
GAGCAGGGGC AGGAGGTTGG CGGGCAGGTG CATCCCTTCG ACGATCGCAC CGAGCTGGCC
GCCGCGCTGC GGGCCCGCTT CGGCGACCGG CCGGGGCAGT CGTGA
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| Protein sequence | MSGNPRPRSV TGIRLGNLAA RLAAESGADA VDLRPGPTEP TVTGVTHASQ EVRPGDLYAA
LPGARRHGAE FVSAAARAGA VAVLTDPDGA AATAEVDLPM LVVPDPRAVL GDLASVVYGD
PTAGLTVIGV TGTAGKTSTA YLVESGLRAA GHTTGLIGTV ETRLGDLVVD SVRTTPEATD
LHAMLAAARE RGVTAVVMEV SSHALAMGRV GGVRFTVGGY TNFGSDHLDF HADSVDYFAA
KAKLFDGRCE VEVLNHDDPA LLPLHRPATV TYSAAGDGAA TWWADEAGGE GYAQRFTLHG
PDGLTLPAGV ALPGRHNVAN ALLAVAVLVA AGVAPRTAVA GVADCGGVPG RLELVPSPGP
VRGVVDYAHK TDAIVAALAA LREFSTGRLI CLLGAGGDRD RGKRPLMGVA AAEGADVVLV
TDDNPRTEDP ADIRAEVLAG VRRADTEAQV LEVPGRRAAI AEAVQLAAPG DVVALLGKGH
EQGQEVGGQV HPFDDRTELA AALRARFGDR PGQS
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