Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3208 |
Symbol | |
ID | 5059673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3674891 |
End bp | 3675580 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640475456 |
Product | hypothetical protein |
Protein accession | YP_001160020 |
Protein GI | 145595723 |
COG category | [S] Function unknown |
COG ID | [COG1799] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.305959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGCGC TGCGCAAGGC GGGGGTCTGG CTCGGTCTGG TCGAGGAGGA CGACGAGCGG GCTTACGACG ACGGTGGCTA CGACAAGGGG GACTACCGCG AGTCGCGGTA TCGGTCGAGC CGATACTCCG AGGACTTCGG AGACGACGAC GCCGACGACG CCGAGGAGGC CGCCCCGCCC CGCTCGCGGC TCGGCGACCG GGGGCGCCTG GAGCGGGCTG CGGCGCGGGC CAGTGACGTG GATCACCGTG AGGACGGCGA GCAGCCGGAG CGGGTCGAGC GCACCAGCGT CCGGTCGATC ACCCGGTCCG CCCCCGAGCC GTCTGGCGCC CTGAGCTACC ACACCCGCGA CAACCTGGCC TTGGCGCCGC AGGCGCCGGT GCGGGAGCGT GTGCCGGTGG AGGAGGATCA GCGTTACCAG ATCACCACGC TGCACCCGAC GACCTACCGG GAGGCGCGGA CGATCGGCGA GCACTTCCGA GACGGTGTCC CCGTGATCAT CAACCTGACG GAGATGGATG AGGCGGATGC GCGGCGACTG GTTGACTTCG CCGCCGGGCT CGCGTTCGGG CTGCGCGGTA CGATCGAGCG CGTGACCAAT CGGGTGTTCC TGCTTTCGCC GGCCAATGTC CAGGTCACCG CGGAGGACAA AGCCAAGATC GCTGAGGGTG GTTTCTTTAG CCTCAGTTGA
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Protein sequence | MGALRKAGVW LGLVEEDDER AYDDGGYDKG DYRESRYRSS RYSEDFGDDD ADDAEEAAPP RSRLGDRGRL ERAAARASDV DHREDGEQPE RVERTSVRSI TRSAPEPSGA LSYHTRDNLA LAPQAPVRER VPVEEDQRYQ ITTLHPTTYR EARTIGEHFR DGVPVIINLT EMDEADARRL VDFAAGLAFG LRGTIERVTN RVFLLSPANV QVTAEDKAKI AEGGFFSLS
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