Gene Strop_3208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3208 
Symbol 
ID5059673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3674891 
End bp3675580 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content69% 
IMG OID640475456 
Producthypothetical protein 
Protein accessionYP_001160020 
Protein GI145595723 
COG category[S] Function unknown 
COG ID[COG1799] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.305959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCGC TGCGCAAGGC GGGGGTCTGG CTCGGTCTGG TCGAGGAGGA CGACGAGCGG 
GCTTACGACG ACGGTGGCTA CGACAAGGGG GACTACCGCG AGTCGCGGTA TCGGTCGAGC
CGATACTCCG AGGACTTCGG AGACGACGAC GCCGACGACG CCGAGGAGGC CGCCCCGCCC
CGCTCGCGGC TCGGCGACCG GGGGCGCCTG GAGCGGGCTG CGGCGCGGGC CAGTGACGTG
GATCACCGTG AGGACGGCGA GCAGCCGGAG CGGGTCGAGC GCACCAGCGT CCGGTCGATC
ACCCGGTCCG CCCCCGAGCC GTCTGGCGCC CTGAGCTACC ACACCCGCGA CAACCTGGCC
TTGGCGCCGC AGGCGCCGGT GCGGGAGCGT GTGCCGGTGG AGGAGGATCA GCGTTACCAG
ATCACCACGC TGCACCCGAC GACCTACCGG GAGGCGCGGA CGATCGGCGA GCACTTCCGA
GACGGTGTCC CCGTGATCAT CAACCTGACG GAGATGGATG AGGCGGATGC GCGGCGACTG
GTTGACTTCG CCGCCGGGCT CGCGTTCGGG CTGCGCGGTA CGATCGAGCG CGTGACCAAT
CGGGTGTTCC TGCTTTCGCC GGCCAATGTC CAGGTCACCG CGGAGGACAA AGCCAAGATC
GCTGAGGGTG GTTTCTTTAG CCTCAGTTGA
 
Protein sequence
MGALRKAGVW LGLVEEDDER AYDDGGYDKG DYRESRYRSS RYSEDFGDDD ADDAEEAAPP 
RSRLGDRGRL ERAAARASDV DHREDGEQPE RVERTSVRSI TRSAPEPSGA LSYHTRDNLA
LAPQAPVRER VPVEEDQRYQ ITTLHPTTYR EARTIGEHFR DGVPVIINLT EMDEADARRL
VDFAAGLAFG LRGTIERVTN RVFLLSPANV QVTAEDKAKI AEGGFFSLS