Gene Strop_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3160 
Symbol 
ID5059625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3626060 
End bp3627508 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content69% 
IMG OID640475408 
Productpyruvate kinase 
Protein accessionYP_001159972 
Protein GI145595675 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0469] Pyruvate kinase 
TIGRFAM ID[TIGR01064] pyruvate kinase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0251321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTGA CACGCCGCGC AAAGATTGTT TGCACACTTG GCCCCGCCAC CTCCTCGCCG 
GAGCGTATTC GCGGCCTCGT TGAGGCCGGA ATGGATGTGG CGAGGCTCAA CTTCAGCCAC
GGCAGCCATG CCGACCACGA GGCGGTCTGC CGGCTGGTTC GGGAGGCGGC CGAGGCGGCG
GGGAGGCCGG TCGCGGTCCT CGCCGATCTC CAGGGCCCCA AGATCCGGCT TGGCCGGTTC
GCCGACGGCC CGCACGAGTG GCGCACCGGT GACTCGGTGG TGATCACCAG TGATGACATC
CTCGGTACCC GGGATCGGGT TGCCTGCACC TACCGCAAGC TTCCCCAGGA GGTGAAGCCC
GGCGACCGGC TGCTCATCGA CGACGGCCGA GTCGCGGTCG AGGTCACCGA CGTTACCGGC
AACGACATCC GTTGCCTGGT CACCGAGGGC GGACCGGTCT CCAACAACAA GGGTGTGTCG
CTGCCAAACG TAGCGGTCAG TGTCCCCGCG CTCTCGGACA AGGACGCCGA GGACCTGCGG
TTCGCCCTCG GCCTCGGTGC CGACCTGGTG GCGCTCTCCT TCGTCCGTTC CGCCGACGAC
ATCAAGCAGG TCCACTCCAT CATGTCCGAG GAGGGCGTGC ACCGGCCGGT GCTGGCCAAG
GTGGAGAAGC CGGAGGCAGT GGAGCAGCTT GGGGCGATCG TCCTGGCCTT CGACGGGGTC
ATGGTGGCCC GTGGTGACCT CGGCGTGGAG ATGCCGCTGG ACCAGGTGCC CCTGGTGCAG
AAGCGCGCGG TGCAGCTCTG CCGAGAGAAC GCCAAGCCGG TCATCGTCGC CACCCAGATG
CTCGACTCCA TGATTGAGAA CTCCCGGCCC ACCCGTGCTG AGGCCTCCGA TGTGGCCAAC
GCCGTGCTCG ACGGCGCGGA CGCGGTGATG CTCTCCGGCG AGACCAGCGT CGGGAAGTAC
CCGGTGCTCA CCGTGAGCAC CATGGCAAAG ATCGTGGCGA CGACGGAGGC CGGCTCGATC
GCGGTGCCTC GGCTCCAGCA CGATCCACGT ACCCACGGGG GCGCGCTTAC CATCGCCGCG
TCGTCGATCG CCCGGGCGAT CGACGCCAAA GCCCTGGTGG CGTTCTCGCA GACCGGCGAC
ACCGTCCGGC GGCTCTCCCG ACTGCACTGT GACCTGCCGC TACTCGCTTT CACCCCGGTG
CCGGAGGTGC GTAACCAGCT CGCCCTCTCC TGGGGTGTGC AGACCTTCCT GATGCCCTTC
GTTGAGCACA CCGACGCCAT GTTCCGGCAG GTCGACGAGG CGCTGCTCGG CCTCGGTCGG
GCCAACCCCG GCGATTACGT CGTGATCGTC GCCGGTAGTC CGCCCGGAAC TCCCGGCTCG
ACCAACACCC TTCGCGTGCA CCAGCTCGGG TCGCTGGTCG ACCTCGCCGC GGCCCGGGCG
CTCCAGTGA
 
Protein sequence
MGVTRRAKIV CTLGPATSSP ERIRGLVEAG MDVARLNFSH GSHADHEAVC RLVREAAEAA 
GRPVAVLADL QGPKIRLGRF ADGPHEWRTG DSVVITSDDI LGTRDRVACT YRKLPQEVKP
GDRLLIDDGR VAVEVTDVTG NDIRCLVTEG GPVSNNKGVS LPNVAVSVPA LSDKDAEDLR
FALGLGADLV ALSFVRSADD IKQVHSIMSE EGVHRPVLAK VEKPEAVEQL GAIVLAFDGV
MVARGDLGVE MPLDQVPLVQ KRAVQLCREN AKPVIVATQM LDSMIENSRP TRAEASDVAN
AVLDGADAVM LSGETSVGKY PVLTVSTMAK IVATTEAGSI AVPRLQHDPR THGGALTIAA
SSIARAIDAK ALVAFSQTGD TVRRLSRLHC DLPLLAFTPV PEVRNQLALS WGVQTFLMPF
VEHTDAMFRQ VDEALLGLGR ANPGDYVVIV AGSPPGTPGS TNTLRVHQLG SLVDLAAARA
LQ