Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3160 |
Symbol | |
ID | 5059625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3626060 |
End bp | 3627508 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640475408 |
Product | pyruvate kinase |
Protein accession | YP_001159972 |
Protein GI | 145595675 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0469] Pyruvate kinase |
TIGRFAM ID | [TIGR01064] pyruvate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0251321 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGTGA CACGCCGCGC AAAGATTGTT TGCACACTTG GCCCCGCCAC CTCCTCGCCG GAGCGTATTC GCGGCCTCGT TGAGGCCGGA ATGGATGTGG CGAGGCTCAA CTTCAGCCAC GGCAGCCATG CCGACCACGA GGCGGTCTGC CGGCTGGTTC GGGAGGCGGC CGAGGCGGCG GGGAGGCCGG TCGCGGTCCT CGCCGATCTC CAGGGCCCCA AGATCCGGCT TGGCCGGTTC GCCGACGGCC CGCACGAGTG GCGCACCGGT GACTCGGTGG TGATCACCAG TGATGACATC CTCGGTACCC GGGATCGGGT TGCCTGCACC TACCGCAAGC TTCCCCAGGA GGTGAAGCCC GGCGACCGGC TGCTCATCGA CGACGGCCGA GTCGCGGTCG AGGTCACCGA CGTTACCGGC AACGACATCC GTTGCCTGGT CACCGAGGGC GGACCGGTCT CCAACAACAA GGGTGTGTCG CTGCCAAACG TAGCGGTCAG TGTCCCCGCG CTCTCGGACA AGGACGCCGA GGACCTGCGG TTCGCCCTCG GCCTCGGTGC CGACCTGGTG GCGCTCTCCT TCGTCCGTTC CGCCGACGAC ATCAAGCAGG TCCACTCCAT CATGTCCGAG GAGGGCGTGC ACCGGCCGGT GCTGGCCAAG GTGGAGAAGC CGGAGGCAGT GGAGCAGCTT GGGGCGATCG TCCTGGCCTT CGACGGGGTC ATGGTGGCCC GTGGTGACCT CGGCGTGGAG ATGCCGCTGG ACCAGGTGCC CCTGGTGCAG AAGCGCGCGG TGCAGCTCTG CCGAGAGAAC GCCAAGCCGG TCATCGTCGC CACCCAGATG CTCGACTCCA TGATTGAGAA CTCCCGGCCC ACCCGTGCTG AGGCCTCCGA TGTGGCCAAC GCCGTGCTCG ACGGCGCGGA CGCGGTGATG CTCTCCGGCG AGACCAGCGT CGGGAAGTAC CCGGTGCTCA CCGTGAGCAC CATGGCAAAG ATCGTGGCGA CGACGGAGGC CGGCTCGATC GCGGTGCCTC GGCTCCAGCA CGATCCACGT ACCCACGGGG GCGCGCTTAC CATCGCCGCG TCGTCGATCG CCCGGGCGAT CGACGCCAAA GCCCTGGTGG CGTTCTCGCA GACCGGCGAC ACCGTCCGGC GGCTCTCCCG ACTGCACTGT GACCTGCCGC TACTCGCTTT CACCCCGGTG CCGGAGGTGC GTAACCAGCT CGCCCTCTCC TGGGGTGTGC AGACCTTCCT GATGCCCTTC GTTGAGCACA CCGACGCCAT GTTCCGGCAG GTCGACGAGG CGCTGCTCGG CCTCGGTCGG GCCAACCCCG GCGATTACGT CGTGATCGTC GCCGGTAGTC CGCCCGGAAC TCCCGGCTCG ACCAACACCC TTCGCGTGCA CCAGCTCGGG TCGCTGGTCG ACCTCGCCGC GGCCCGGGCG CTCCAGTGA
|
Protein sequence | MGVTRRAKIV CTLGPATSSP ERIRGLVEAG MDVARLNFSH GSHADHEAVC RLVREAAEAA GRPVAVLADL QGPKIRLGRF ADGPHEWRTG DSVVITSDDI LGTRDRVACT YRKLPQEVKP GDRLLIDDGR VAVEVTDVTG NDIRCLVTEG GPVSNNKGVS LPNVAVSVPA LSDKDAEDLR FALGLGADLV ALSFVRSADD IKQVHSIMSE EGVHRPVLAK VEKPEAVEQL GAIVLAFDGV MVARGDLGVE MPLDQVPLVQ KRAVQLCREN AKPVIVATQM LDSMIENSRP TRAEASDVAN AVLDGADAVM LSGETSVGKY PVLTVSTMAK IVATTEAGSI AVPRLQHDPR THGGALTIAA SSIARAIDAK ALVAFSQTGD TVRRLSRLHC DLPLLAFTPV PEVRNQLALS WGVQTFLMPF VEHTDAMFRQ VDEALLGLGR ANPGDYVVIV AGSPPGTPGS TNTLRVHQLG SLVDLAAARA LQ
|
| |