| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3140 |
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| Symbol | rpsA |
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| ID | 5059604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3604512 |
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| End bp | 3605993 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640475387 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001159952 |
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| Protein GI | 145595655 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGCA GCATCGAGGC CCCCTCGAGC GCCACCAAGG TCACCGTCGA CGATCTCGGA
AGCGAAGAGG CCTTCCTCGC CGCGATCGAC GAGACCATCA AGTACTTCAA TGACGGCGAC
ATTGTCGAAG GAACCGTCGT CAAGGTCGAT CGGGACGAGG TCCTGCTCGA CATCGGCTAC
AAGACCGAGG GCGTCATCCC CTCTCGGGAG CTGTCGATCA AGCACGACGT GGACCCCGCC
GAGGTCGTCT CGGTCGGTGA CCACATTGAG GCCCTTGTTC TCCAGAAAGA GGACAAGGAG
GGGCGGCTGA TCCTCTCGAA GAAGCGGGCG CAGTACGAGC GCGCCTGGGG CACGATCGAG
AAGATCAAGG ACGAGGATGG TGTGGTCCGC GGCTCGGTCA TCGAGGTGGT CAAGGGTGGC
CTGATCCTCG ACATCGGGTT GCGCGGCTTC CTGCCGGCCT CCCTGGTCGA GATGCGCCGG
GTGCGTGACC TCCAGCCGTA CGTCGGCCGT GAGCTTGAGG CCAAGATCAT CGAGCTGGAC
AAGAACCGCA ACAACGTGGT CCTGTCCCGC CGGGCCTGGC TCGAGCAGAC GCAGTCTGAG
GTGCGTACCG AGTTCCTCAA CAAGCTGCAG AAGGGGCAGG TCCGGAAGGG CGTTGTTTCC
TCGATCGTCA ACTTCGGCGC CTTCGTTGAC CTGGGCGGCG TGGACGGCCT GGTGCACGTC
TCCGAGCTGT CCTGGAAGCA CATCGACCAC CCGTCCGAGG TGGTCGAGGT GGGCCAGGAG
GTCGAGGTCG AGGTCCTCGA CGTCGACCTG GACCGTGAGC GGGTCTCGCT GTCGCTGAAG
GCGACCCAGG AGGACCCGTG GCGTCAGTTC GCCCGCACCC ACGCGATCCA GCAGATCGTG
CCCGGTAAGG TCACCAAGCT GGTGCCGTTC GGCGCGTTCG TCCGGGTGGA CGACGGTATC
GAGGGTCTGG TCCACATCTC CGAGCTGGCC GAGCGCCACG TGGAGATCCC GGAGCAGGTC
GTCCAGGTCG GCTCCGAGGT CATGGTCAAG GTCATCGACA TCGACCTGGA GCGTCGCCGG
ATCTCGCTGT CGCTCAAGCA GGCCAACGAG GGCTTCGTCG AGGGCGAGGA GCACTTCGAC
CCGACCCTTT ACGGCATGGC GGCGACCTAC GACGCCGAGG GCAACTACAT CTACCCCGAG
GGCTTCGACC CCGAGACGGG CGAGTGGCTC GAGGGCTACG AGAAGCAGCG CGAGACCTGG
GAGCAGCAGT ACGCCGAGGC GCGTCTGCGT TGGGAGGCCC ACCAGAAGCA GGTGCAGGCA
TCCCGCGCCG CCGACGCCGA GGCTGCCGCC AACCCGCCGG CCGCCAGCCC GACCACCACG
ACGACCGCGG CTCCGAGCCG GCAGGCGGAG GAGCCGGCCG GCACCCTCGC CACCGACGAG
GCGCTCGCCG CGCTGCGCGA GAAGCTCGCC GGCGGCAAGT GA
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| Protein sequence | MTSSIEAPSS ATKVTVDDLG SEEAFLAAID ETIKYFNDGD IVEGTVVKVD RDEVLLDIGY
KTEGVIPSRE LSIKHDVDPA EVVSVGDHIE ALVLQKEDKE GRLILSKKRA QYERAWGTIE
KIKDEDGVVR GSVIEVVKGG LILDIGLRGF LPASLVEMRR VRDLQPYVGR ELEAKIIELD
KNRNNVVLSR RAWLEQTQSE VRTEFLNKLQ KGQVRKGVVS SIVNFGAFVD LGGVDGLVHV
SELSWKHIDH PSEVVEVGQE VEVEVLDVDL DRERVSLSLK ATQEDPWRQF ARTHAIQQIV
PGKVTKLVPF GAFVRVDDGI EGLVHISELA ERHVEIPEQV VQVGSEVMVK VIDIDLERRR
ISLSLKQANE GFVEGEEHFD PTLYGMAATY DAEGNYIYPE GFDPETGEWL EGYEKQRETW
EQQYAEARLR WEAHQKQVQA SRAADAEAAA NPPAASPTTT TTAAPSRQAE EPAGTLATDE
ALAALREKLA GGK
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