Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3134 |
Symbol | |
ID | 5059598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3596465 |
End bp | 3597262 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640475381 |
Product | hypothetical protein |
Protein accession | YP_001159946 |
Protein GI | 145595649 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.93159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCC GGGATCTGGC GCTGGTGGGC GCGCCCAACG CACGTGACCT CGGCGGGCTG GTGGGTGCGG AGGGTCGTCG GGTACGCCGG GGGTTGCTGC TGCGTACCCC GGCGTTGGGA CGGCTGACTG ACGAGGACCT ACCGGTGCTG GCGAAGCTGA CGCCGGCCTG CGTGGTGGAC CTGCGGGACG CCGCGGAGGC GGCGGTGGCC CCGCCGGACC GGCTGCCGGG AGAACCCCGG GTGGTGCACC TGCCGGTGCA CGACGCTGCC CATCCGGTCT TCACCTACGT GTCGGCGGTG CTGCTCGGTC ACGACCTCAG CGCGTACGAG GAACTGGCAC AGGAGGGCAC TCCGGCGGCG ATGCGATCCA TCTACCGCTG GTTCGTGACC GGGGAGTCGG CGCGGGCCGG CTACGGTGCG GCGGTGCGGT TGGCAGCGGA GGCGGCGAGC CTGCCCCTGC TCTACCACTG CTCGGCCGGC AAGGATCGCA CCGGCTGGTT GACGGCGGTG CTGCTGCACG CCCTCGGGGT GGACGAGGCC ACGATCCGGG CGGACTACCT CGCCAACAAC GCGCTCACCG AGAGCCTGCG GGAGGTGCTC CTCGCCGCGA TGCGTCGGCG GAGCCCGGAG TTGGACGTCA CCGTGGTGCG GCCGGTGCTG GAGGTACGTG ACGAGTACCT CGACGCCGGG TACGACGAGG CGCGGCGGGT GTACGGGTCG TTCGGGTCGT ACCTGCGTTA CGGGCTCGGG GTGGACGACG AACTGGTGAC GGCCTTGCGG GCGCGCTTGC TGGAGTGA
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Protein sequence | MTGRDLALVG APNARDLGGL VGAEGRRVRR GLLLRTPALG RLTDEDLPVL AKLTPACVVD LRDAAEAAVA PPDRLPGEPR VVHLPVHDAA HPVFTYVSAV LLGHDLSAYE ELAQEGTPAA MRSIYRWFVT GESARAGYGA AVRLAAEAAS LPLLYHCSAG KDRTGWLTAV LLHALGVDEA TIRADYLANN ALTESLREVL LAAMRRRSPE LDVTVVRPVL EVRDEYLDAG YDEARRVYGS FGSYLRYGLG VDDELVTALR ARLLE
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