Gene Strop_3134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3134 
Symbol 
ID5059598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3596465 
End bp3597262 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content72% 
IMG OID640475381 
Producthypothetical protein 
Protein accessionYP_001159946 
Protein GI145595649 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.93159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCC GGGATCTGGC GCTGGTGGGC GCGCCCAACG CACGTGACCT CGGCGGGCTG 
GTGGGTGCGG AGGGTCGTCG GGTACGCCGG GGGTTGCTGC TGCGTACCCC GGCGTTGGGA
CGGCTGACTG ACGAGGACCT ACCGGTGCTG GCGAAGCTGA CGCCGGCCTG CGTGGTGGAC
CTGCGGGACG CCGCGGAGGC GGCGGTGGCC CCGCCGGACC GGCTGCCGGG AGAACCCCGG
GTGGTGCACC TGCCGGTGCA CGACGCTGCC CATCCGGTCT TCACCTACGT GTCGGCGGTG
CTGCTCGGTC ACGACCTCAG CGCGTACGAG GAACTGGCAC AGGAGGGCAC TCCGGCGGCG
ATGCGATCCA TCTACCGCTG GTTCGTGACC GGGGAGTCGG CGCGGGCCGG CTACGGTGCG
GCGGTGCGGT TGGCAGCGGA GGCGGCGAGC CTGCCCCTGC TCTACCACTG CTCGGCCGGC
AAGGATCGCA CCGGCTGGTT GACGGCGGTG CTGCTGCACG CCCTCGGGGT GGACGAGGCC
ACGATCCGGG CGGACTACCT CGCCAACAAC GCGCTCACCG AGAGCCTGCG GGAGGTGCTC
CTCGCCGCGA TGCGTCGGCG GAGCCCGGAG TTGGACGTCA CCGTGGTGCG GCCGGTGCTG
GAGGTACGTG ACGAGTACCT CGACGCCGGG TACGACGAGG CGCGGCGGGT GTACGGGTCG
TTCGGGTCGT ACCTGCGTTA CGGGCTCGGG GTGGACGACG AACTGGTGAC GGCCTTGCGG
GCGCGCTTGC TGGAGTGA
 
Protein sequence
MTGRDLALVG APNARDLGGL VGAEGRRVRR GLLLRTPALG RLTDEDLPVL AKLTPACVVD 
LRDAAEAAVA PPDRLPGEPR VVHLPVHDAA HPVFTYVSAV LLGHDLSAYE ELAQEGTPAA
MRSIYRWFVT GESARAGYGA AVRLAAEAAS LPLLYHCSAG KDRTGWLTAV LLHALGVDEA
TIRADYLANN ALTESLREVL LAAMRRRSPE LDVTVVRPVL EVRDEYLDAG YDEARRVYGS
FGSYLRYGLG VDDELVTALR ARLLE