Gene Strop_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3094 
Symbol 
ID5059558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3547329 
End bp3548099 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content74% 
IMG OID640475344 
Product6-phosphogluconolactonase 
Protein accessionYP_001159909 
Protein GI145595612 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR01198] 6-phosphogluconolactonase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.257113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.068745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG CGAGTATCGC GGTCCATGCC GATGCCGAGC TGCTGGCACA GGCGGTGGCC 
GCCCGGCTAC TGGTCCGAAT CCTCGATGCA CAGACCGGGC GCGGACAGGC GTCGGTGGTG
TTGACCGGCG GCCGGATCGC CACCGCCGTC TATCGGGCGT TGGCGGCGCT GCCCGCCCGA
GAGGCGGTCG ACTGGTCGCG GGTGGACGTC TGGTGGGGAG ACGAGCGGTT CCTGCCCGAG
GGTGACCCGC AGCGCAACGC GACGCAGGCC CGGGCCGCGC TCCTGGACGC GGTGCCGCTG
GACCCGGCCC GGGTGCACCC GATGCCAGCA TCGGACGACC CGGCCGGCAG CGACCCGGAG
GAGGCCGCCG GCCGGTACGC GGCGGAGCTG GCCCGGGCGG CCCGCCCCGG CACCGCCGTC
CTCCCCCACT TCGACGTGCT CCTGCTGGGG GTGGGCGAGG ACGGCCACGT GGCCTCGGTC
TTCCCGGAGC ATCCGGTGCA CTACGAGAAC CGGCCGGTCA GTGCGGTCCG GGGCAGCCCG
AAGCCGCCGC CGATCCGTAC CACCCTGACC CTGCCGACGA TCAACACCGC GGAGGAGGTG
TGGTTGATCG CCAGCGGTGC GGACAAAGCC CGTGCCGTCG GCCTGGCGTT GGCTGGCGCG
GGGCCGGTGC AGCTACCGGC CGCGGGTGTG CGGGGCATCA ACCGCACCCT CTGGCTGCTG
GATCGAAGCG CCGCAGCCGA CCTGCCCGCC CGTTTCCGCA GCGTGCGCTG A
 
Protein sequence
MSEASIAVHA DAELLAQAVA ARLLVRILDA QTGRGQASVV LTGGRIATAV YRALAALPAR 
EAVDWSRVDV WWGDERFLPE GDPQRNATQA RAALLDAVPL DPARVHPMPA SDDPAGSDPE
EAAGRYAAEL ARAARPGTAV LPHFDVLLLG VGEDGHVASV FPEHPVHYEN RPVSAVRGSP
KPPPIRTTLT LPTINTAEEV WLIASGADKA RAVGLALAGA GPVQLPAAGV RGINRTLWLL
DRSAAADLPA RFRSVR