Gene Strop_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3056 
Symbol 
ID5059520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3495062 
End bp3502192 
Gene Length7131 bp 
Protein Length2376 aa 
Translation table11 
GC content70% 
IMG OID640475306 
Productthioester reductase domain-containing protein 
Protein accessionYP_001159871 
Protein GI145595574 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[I] Lipid transport and metabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[COG3321] Polyketide synthase modules and related proteins 
TIGRFAM ID[TIGR01746] thioester reductase domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0594537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGCG AGTTGATCCG ACCGCTGTCC GAGCTGCTCG GCGAACACGC CGTCCGGCGC 
GGAGACAAGA TCGCCTTCGC CGACGGTAAG CGTGGCGTCA GCTACGCCGA CCTCGACCGG
CGGACCGCTC GACTGGCCGG ACACCTGGCC GCCCTGGGGT TGGAGACCGG TGGGCGAGCC
GTGATCCTGA TGGGCAACAG CGTCGAGGCG GTGGAGAGCA GCCTTGCGGT GATCCGGGCG
GGCGGCATCG CGGTACCGCT CAACCCACAA TCCTCCACGG CTGAGATCGA CCACCTTCTC
GACGATGCCG AACCGACGGT CATCGTGTGT GACCCGGCCC GCTTCGGCCA GGTGGTCCGG
CGGCACCACC CGGGTCGACC ACCACGGGTC ATCCGTACCG GCGAGGCCGA AGCCGAGGAA
GACGCCGCAG CAGAGACGGT GCGGTACGAG GAGTTGATGG GCACCGAGCC GAGCGGACCG
GCTCCCGACG AGGCTGCGCT GGATGCCCCG GCGTGGATGC TCTACACGTC GGGGACCACC
GGTCGGCCAA AGGGGGTGCT GTACTCGCTG CGCAGTTCGT TGTGGCTGGT CGCGGCGGGG
CATGAGCCGG TGCTGGGGCT GTCGGAGCAG GATCGTCTGT TGTGGCCGAT GCCACTGTTC
CACGGGCTCG GGCAGAACCT GTGCGTGCTG GGGGTCACGG CGGTCGGCGC GAGTGCGCGG
CTGATGAGCG GCTTCGCACC GTCCGAGGTC CGCGACCTCC TGCGCGAGGA GGCCATCACG
TTCCTGGCCG GGGTGCCGAC CACCTACCAC TACCTGCTGG ACCAGGTCAC CGACGCCACC
ACCGACCTCT CCGCGCTACG ACTAGGTTTC GTGGCGGGAT CGGCGAGCGG TGCCGCGTTG
GGCAGCCGCT TCGAGGAGGC GTTCGGTGTT CCCCTGGTGG ACCAGTACGG GTCCTCCGAA
ACCGGTGCCA TCACCTCGAA CCGGCCGTTC GGGGAGCGGG TCCCCGGCTC CGTCGGGCCA
CCGCTCCCCG GCGTGGACAT CCGCCTGGTC GACCCCGACA CCGGCCAGGA CGTGCCCACC
GGGAAGGAGG GCGAGGTCTG GGTCGCCGGA CCGAACCTCA TGCTCGGATA CCACGGGCAG
CCCGATGCCA CCGCCGCTGT CCTGCGCGAC GGCTGGTACC GCACCGGTGA CCTTGGGCGG
CGGGACGCCC TGGGGCACCT GACCCTGACC GGCCGACGCA AGGAGCTGAT CATCCGTGGT
GGCGAGAACA TCCACCCCGT CGAGGTCGAG GAGGTACTGC GTACCGCCGC CGGGGTAGCC
GACGTGGCGG TGGGTGCCGA GCCCCACGAC GTGCTCGGTG AGGTGCCGGT GGCCTATCTG
GTGCCCGGCC CCGAAGGCGT GGACGCGGCG ACGGTCTTCG CGCACTGCCG GCGGCTGCTC
TCCTTCTTCA AGGTTCCCGA CAGGCTCTAC ACGATCGAAC GCGTCCCCCG GACCAGCACG
GGCAAGATCA CCCGGCACCT GCTGGCAGAG GCGGACCCCC AACTGCTGGG CGTAGCCACC
CCGGACGGCG AGGCCGGCGA GGCCGCGCCG ATCGACGGTA CGGCGTGGGC AGCGCAGTTG
CGGGAGTTGC CGCCAAGCGA GCGCACCCGG AGCGTCCTGG AGCTGGTTCG CAGCGAGGTA
GCCCGCGCCG TGGGTCTCGA CTCTGCCGAA CAGATCCGAC CCGACCAGCC CTTCGTCGAC
CTCGGGCTCG GTTCCCTCGC CGTCGTCGGG GTTGGTCAGC GGCTCTGCGC CCGAGTCGGG
CTACGGCTTC CGGCGACCGT CGTGTTCGAC CATCCGACGC CCACCGCCCT TGCGGCCCGG
CTGGTCGCCG AGGTGAGCGG AACGCGTGCG CCGGCCGAAG GCACCCACGC TCCGGACCGG
GCTGGTGCCG ACGAGCCGAT CGCGATCGTC GCGATGGCCT GCCGATTCCC CGGCGAAGTC
GAGGATCCGG ACCAACTCTG GGCCATGATC GCCGAAGGAC GCGACGCCAC CTCAGAGCTG
CCGGACGACC GGAACTGGCC GCTGGACACC CTCATCGACC CGAACCCGGA CCACCTCGGC
ACCAGCTACG TATCCCGGGG CGGGTTCATC TCCGACCCCG CCGGCTTCGA CGCCGCCTTC
TTCGGGATCA GCCCGCGGGA GGCGACCGCG ATGGACCCGC AGCAGCGGGT ACTCCTGGAG
ATCGCCTGGG AGGCGTTCGA GCGTGCCGGA ATCGATCCCA CCCGGGTGGC TGGCTCCCCG
ACCGGCCTCT TCATCGGCAC GAAGGGGCAG ACGTACAGTT CCCTCGCCGC GCCGGCCTCG
GAGTACGAGG GCTACCTGGG CTTCGCCACC TCGGGCAGTG TGCTGTCTGG ACGCGTCGCC
TACACCCTCG GGTTGGAAGG TCCGGCCATC ACGGTGGACA CCGCCTGCTC GGCGTCGTTG
GTGGCGCTCC ACCTGGCGTG TCAGTCGCTG CACGCCGGGG AGTCCCGCCT CGCCCTCGCC
GGTGGGGTCA CCGTGATGGC CACCCCCGAC GATCTGATCA CGTTCAGCCG TCAGCGTGGC
CTCGCCGTGG ATGGCCGGGT CAAGGCGTTC GCCGCAGCAG CAGACGGTAC CGCCTTCGGC
GAAGGTGCGG GGGTGGTGCT CCTGGAGCGC CTCTCGGACG CGCGCCGGGC GGGGCGGAAG
GTGCTCGCCG TCATCCGGGG CAGCGCGGTC AACCAGGACG GCACGTCGAA CGGGCTCACC
GCCCCCAACG GCCAGGCCCA GCAACGGTTG ATCCGTCAGG CACTCGCCGC CGCCCGGCTC
GGTCCCGCCG ACATCGACCT GGTCGAGGCG CACGGCACGG GAACCGCGCT CGGTGACCCC
ATCGAAGCCG AGGCGATTCT GGCCACCTAC GGGCAGGGGC GGGCGCCGGA GCAACCGGTA
TGGCTCGGAT CAGTCAAGTC CAACATCACC CACACCCAGG CGGCTGCCGG CACTGCCGGT
CTCATCAAGA TCGTGCAGGC GATGCGCCAC CGGACTCTCC CGGCCACGCT CAACGTTGAC
CAACCGTCGC CGCACGTCGA CTGGACCTCC GGCCAGGTAC GCCTGGCGAC CGAGCCCCGG
CCCTGGCAGG TGGCCGGCCG GCCCCGGCGG GCCGGGGTCT CCGCCTTCGG GATCAGCGGC
ACCAATGCGC ATGTCATCGT GGAAGAGAGC CCGGTCGAGC CGCCGGTGTC GGCGAGCGTT
GACGAGTCCC GGAGCCCCGC CGCCGTTCCC TGGCTGCTCT CCGCCAGGTC GCCGGTGGCG
CTGCGGACGC AGGCTGCCCG GCTGGCCTCG ATGACGCGCT CCGCGCCCGA GCTCAGCCCG
GCGGCCGTGG GCCGCGCGCT GGCTCGCTCG CGCGCGGGCC TGGACCATCG GGCGACCGTG
GTGGGTACGG AGACCAAGCA ACTCCTGGCG GGCCTGGAGG CCCTCGCCTC GGGCACGCCG
GCGGCCGGGC TGACGACGGC ACGCGCGGTG CCCGACCGGG CCGTCGCTGT GCTCTTCACC
GGCCAGGGCG CGCAGTACCC GGGCATGGGC CGCCACCTTT ACGACAGCTT CGACGTCTTC
GCCGCCGCGC TGGACGAGGT CTGTCAGTTT CTGGCACCGG AGGTACGGCC GGCCCTGCTG
GCGCCGGCCG GGACGCCGGA TGACGAGTCG ATCCACCAAA CCGGTCTCGC CCAGCCCGCC
CTCTTCGCCC TGGGGGTCGC CCAATTCGCC CTCCTGCGCT CCTGGGGGGT ACACCCGAGC
GTGCTCGCTG GGCACTCCAT CGGCGAGATC ACCGCGGCAC ACGTGGCCGG GGTACTCTCG
CTGCCGGATG CGGCCCGCCT GGTCAATGCC CGGGGCGCCC TGATGCAGGC GCTGCCCCCG
GGCGGGGCGA TGCTCGCGGT GAAGGCCACC GAGGAGGAGA TACTGCCCCT GCTCTCCGGG
GAGGAGTCGC GGATCGGAAT CGCCGCGATC AACGCGACCC GGTCGGTCGT CGTCTCGGGC
GACGAAGAGG CCGTGACCTC GCTCGCCACC CGGCTGGCCG AACACGGGCA TCGGGCCACG
CGCCTCCGGG TGAGCCATGC CTTCCACTCT GCTCACATGG ACCCCGTCCT CGACGACTTC
CGCGCCGTCG CGGAGTCGCT GGCCTACCAG CGACCCACCA TTCCGATCGT CTCCACCATG
ACCGGCGTGG CCGCAGGCGC GGAGCTGCTC ACACCGGGGT ACTGGGTCGA GCAACTCCGC
CAGCCGGTTC GCTTCGCGCC AGCGGTACGC GCAATTCGTA CGCAGGGCAC CGACACCTTC
GTCGAACTCG GTCCCGACGG AGTACTGACC GCGCTGGTGC GGGAGACCCT CGGCGCGGAC
GAGCACCACG CGGTGCCGTT CTGCCGTCGT GGCCGGTCGG GTGCCGAGGC CGCTGCCCTG
GGCGCCCTGC ACGCCCTCGG TGTCCCGGTG GAGTGGGAGG GCTTCTTCCC ACCGACCGAC
GAACCCGAGG TCGACCTGCC CACCTACCCG TTCCAACGAC GGCGCTACTG GCTCCCACCC
ACCGCCGTGC CGTCGCCCAC CAGGCCGGGT CCGGCCCTCC GCGAGCGGGT CGGTGGGGCC
GACTCGTCCC GCCTCGGAGC GGCCACCGAA CGGTCAACGG GAACCGTGCC GTCGGCCGGC
GCCACCCCGG CAGTCGACGC CGCGCAGTTG GCGGGGGCCA TGCTCGCAGC TCGGCTCGGT
GCCTTGGACG AGGAGGAGCA GTTCCTGCAC CTGGTCCAGA CCGTCACGGC TCTGGTCGCC
GCCGTTCTCG GTCACGCAGA CCCGGACGAA ATCGATCCAG ACGCGTCCCT GCTGGATCTG
GGCTTCGACT CCCTCACCGC GGTGGAGCTG CGAAACCAGA TCCGCGACCT CAGTGGGGTC
AACCTCCCCG CCTCGCTGGT CTTCGAATTC CCCACCGTGG CAGTCCTCGC CGATCACCTG
CTGAGCCGGG TGCTCCGCGC GGCCGACGAC GACGAGGACC GGGTGGACTT CGCTGCCGAG
GTAACCCTGG CCGCGGACAT CGTCTGCGCG GATGAGGTCA TCACCGCCGT CACCGAGCCT
CGCGAGGTCC TCCTCACCGG AGCGACCGGC TTCCTCGGCG CCTTCCTGCT CCGCGACCTG
ATGCGGAGCA CGAACGCCGT GGTGCACTGC CTCGTGCGGT CCACCGACGA GAAGCCGGCG
CCAGACCGGC TGCGGGACAA CCTCCAGTGG TACCAGCTCT GGGACGAGAT CGATCCGAAC
CGGTTGTCCG TGGTGGTCGG CGACCTGGCC GCTCCGAGGT TCGGCCTGTC GGAGCAGCGG
TACGACGAGT TGTCCCGCCG GGTCGATACG GTCTACCACG CGGCTGCCAC CGTCAACGGT
CTCTACCCCT ACTCCTCGCT GAAGGCAACG AACGTGACCG GCACCGAGGA GATACTGCGG
CTGGCCGCAC GGCATCGCAG CGTTCCGGTC CACCACGTGT CGTCCACGGG CGTCTTCTCC
GCCGAGGTCG TACCCGGTGT CGCCCTGAAG TCGACCGACC CGCCGGGGCC CGCCGCGGCG
CTCTCCTCCG GGTACCGACA GACCAAACTG GTCGCGGAGC AGATCATTGA GATCGCCCGG
GAACGCGGGC TACCGGTGTC GATCTACCGG GTCGACGAGA TCTCCGGCGA CTCGGAGCAG
GGCCGCTGCC AGACGCACGA CTTCGTGTGG CTGAGCATGA AGGGCATCCT GCAGGCGGAG
GCGGTTCCGA CCGACCCGGC CGGCATCTTT CACCTCGTGC CCGTCGACTA CGTCAGCTCG
GCGATCCTGA GGTTGTCCCG GAACGCAAAC GCCGTCAACC ACAACCATCA CCTCGCCAAC
AGCACACACC TGCCGTTCGC CGAGATGACG GACGCACTGC GTGCCCGCGG CTATCGCCTC
GACGAGTTGG GCTGGGACAC CTGGGTCCGG CGAGTACGCT CCAACCCCGA GAACACCATG
GTGGCGATGG TCGACAGCTT CGAGTCCACC ATCTACAGCG GACGCAACCA CTACCTGACG
GTCGACACCT CCGAGACCCG CGCGTTGCTG GCCGGTAGTG GCGTCGACTG TCCGGCCATG
ACCCGGGACC TGTTCGAGAA GTACGTCGAC TTCTTCGTCC GGGTGGGCTA CTTCCCGCCG
CCCGGCGGAC ACCAGACGAC CGGCTCCGCG GGTGGTCGCC TCCACATCCG GCCGGCAACC
ACCGCCGACC TGCCGCGGCT GGCCCAGATC TGCTACGAGG CGTTCGAGGC CACCAACACC
GCGCTGGGTC TACCACCCGA GTGGTCCTCG GAACAGGCGG TGCTGGAGAT GCTCCAGGGA
CGACTCGCCT CACCGAGCTG TGTGAGTGAG GTGGCGGTTG ATGCGACGGG ATCGGTGGTG
GGCTCCAACT TCCTGGTGCT GGGTGAGGAG GTAGCCGCCT TCGGACCGTT GAGCGTCGCC
CCCGAGACAC AGGGAGGCGG GGTGGGACGG ATGCTGATGG AGTCGATAGT CGCCGCCAGC
AACCGGCTTG GCTGCTCCTC CGTGCGGGCC GTCCAGGTCA CCAACAACAC GTCGGCCTAC
CGGCTGTACT CCTCGCTCGG CTTTGTGCCG CAGGAACAGC TCTCCCTCAT GGTCGGGTAC
GTCCCACCGA CTCCCGGCAA CCTGGCGGGG TTCGAGGTGC GGCCCATGAC CGAGGCGGAT
GTTGCCGGCT GCCAGACGCT GTACCGCAAG ATCAACGGTC ATTCCCGGGA CAGCGAAATC
CACATGGCAG CCAAGCGGGC GTTCGACTGG TCAATGCCGT ACGTGGTGCT GGACAAGACC
AACGGGGAGC TCTGCGGCTA CACCACCGGC CTGGCCGACC TGGGTCACCT GGCGGCCACG
TCAGAGGCGG CGGCGTGGGC GCTGTACGCC GGCGCGGGTG AGCTGATGCG CCGCCAGGAT
CCGCATGGCC TGGCTCCCCG GCTGCGCATC CCGGGCCGCC TGGCACCAGA GCTGCTCAGC
TGGGCCGCCC GCACCCGCGG GGTCTCGCTG CTCCGTCTGG AGACGCTGAT CTCGCTGGGC
GGCTACACCC CACCCGAGGG CGGGGTGTCC TGCCCCGGGC TGTCCTACTG A
 
Protein sequence
MRSELIRPLS ELLGEHAVRR GDKIAFADGK RGVSYADLDR RTARLAGHLA ALGLETGGRA 
VILMGNSVEA VESSLAVIRA GGIAVPLNPQ SSTAEIDHLL DDAEPTVIVC DPARFGQVVR
RHHPGRPPRV IRTGEAEAEE DAAAETVRYE ELMGTEPSGP APDEAALDAP AWMLYTSGTT
GRPKGVLYSL RSSLWLVAAG HEPVLGLSEQ DRLLWPMPLF HGLGQNLCVL GVTAVGASAR
LMSGFAPSEV RDLLREEAIT FLAGVPTTYH YLLDQVTDAT TDLSALRLGF VAGSASGAAL
GSRFEEAFGV PLVDQYGSSE TGAITSNRPF GERVPGSVGP PLPGVDIRLV DPDTGQDVPT
GKEGEVWVAG PNLMLGYHGQ PDATAAVLRD GWYRTGDLGR RDALGHLTLT GRRKELIIRG
GENIHPVEVE EVLRTAAGVA DVAVGAEPHD VLGEVPVAYL VPGPEGVDAA TVFAHCRRLL
SFFKVPDRLY TIERVPRTST GKITRHLLAE ADPQLLGVAT PDGEAGEAAP IDGTAWAAQL
RELPPSERTR SVLELVRSEV ARAVGLDSAE QIRPDQPFVD LGLGSLAVVG VGQRLCARVG
LRLPATVVFD HPTPTALAAR LVAEVSGTRA PAEGTHAPDR AGADEPIAIV AMACRFPGEV
EDPDQLWAMI AEGRDATSEL PDDRNWPLDT LIDPNPDHLG TSYVSRGGFI SDPAGFDAAF
FGISPREATA MDPQQRVLLE IAWEAFERAG IDPTRVAGSP TGLFIGTKGQ TYSSLAAPAS
EYEGYLGFAT SGSVLSGRVA YTLGLEGPAI TVDTACSASL VALHLACQSL HAGESRLALA
GGVTVMATPD DLITFSRQRG LAVDGRVKAF AAAADGTAFG EGAGVVLLER LSDARRAGRK
VLAVIRGSAV NQDGTSNGLT APNGQAQQRL IRQALAAARL GPADIDLVEA HGTGTALGDP
IEAEAILATY GQGRAPEQPV WLGSVKSNIT HTQAAAGTAG LIKIVQAMRH RTLPATLNVD
QPSPHVDWTS GQVRLATEPR PWQVAGRPRR AGVSAFGISG TNAHVIVEES PVEPPVSASV
DESRSPAAVP WLLSARSPVA LRTQAARLAS MTRSAPELSP AAVGRALARS RAGLDHRATV
VGTETKQLLA GLEALASGTP AAGLTTARAV PDRAVAVLFT GQGAQYPGMG RHLYDSFDVF
AAALDEVCQF LAPEVRPALL APAGTPDDES IHQTGLAQPA LFALGVAQFA LLRSWGVHPS
VLAGHSIGEI TAAHVAGVLS LPDAARLVNA RGALMQALPP GGAMLAVKAT EEEILPLLSG
EESRIGIAAI NATRSVVVSG DEEAVTSLAT RLAEHGHRAT RLRVSHAFHS AHMDPVLDDF
RAVAESLAYQ RPTIPIVSTM TGVAAGAELL TPGYWVEQLR QPVRFAPAVR AIRTQGTDTF
VELGPDGVLT ALVRETLGAD EHHAVPFCRR GRSGAEAAAL GALHALGVPV EWEGFFPPTD
EPEVDLPTYP FQRRRYWLPP TAVPSPTRPG PALRERVGGA DSSRLGAATE RSTGTVPSAG
ATPAVDAAQL AGAMLAARLG ALDEEEQFLH LVQTVTALVA AVLGHADPDE IDPDASLLDL
GFDSLTAVEL RNQIRDLSGV NLPASLVFEF PTVAVLADHL LSRVLRAADD DEDRVDFAAE
VTLAADIVCA DEVITAVTEP REVLLTGATG FLGAFLLRDL MRSTNAVVHC LVRSTDEKPA
PDRLRDNLQW YQLWDEIDPN RLSVVVGDLA APRFGLSEQR YDELSRRVDT VYHAAATVNG
LYPYSSLKAT NVTGTEEILR LAARHRSVPV HHVSSTGVFS AEVVPGVALK STDPPGPAAA
LSSGYRQTKL VAEQIIEIAR ERGLPVSIYR VDEISGDSEQ GRCQTHDFVW LSMKGILQAE
AVPTDPAGIF HLVPVDYVSS AILRLSRNAN AVNHNHHLAN STHLPFAEMT DALRARGYRL
DELGWDTWVR RVRSNPENTM VAMVDSFEST IYSGRNHYLT VDTSETRALL AGSGVDCPAM
TRDLFEKYVD FFVRVGYFPP PGGHQTTGSA GGRLHIRPAT TADLPRLAQI CYEAFEATNT
ALGLPPEWSS EQAVLEMLQG RLASPSCVSE VAVDATGSVV GSNFLVLGEE VAAFGPLSVA
PETQGGGVGR MLMESIVAAS NRLGCSSVRA VQVTNNTSAY RLYSSLGFVP QEQLSLMVGY
VPPTPGNLAG FEVRPMTEAD VAGCQTLYRK INGHSRDSEI HMAAKRAFDW SMPYVVLDKT
NGELCGYTTG LADLGHLAAT SEAAAWALYA GAGELMRRQD PHGLAPRLRI PGRLAPELLS
WAARTRGVSL LRLETLISLG GYTPPEGGVS CPGLSY