| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3039 |
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| Symbol | |
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| ID | 5059503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3470076 |
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| End bp | 3470672 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640475289 |
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| Product | sigma-70 region 2 domain-containing protein |
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| Protein accession | YP_001159854 |
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| Protein GI | 145595557 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.956019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.605091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCCCCG TCGGCGCTGT ACGATGCTTG TCTATGAGCG ACGACGACGC AGGTCGGCTG
GTGCATGCTG CTGCCAAGGG TGATCAGGCG GCATGGGAAG CGTTGGTCGA CCGGTACGCG
CGGCTGGTGT ACACGGTGGC GCGGGGATTC CGGCTCGACG ATGCTGACGT CGCGGACGTT
AGCCAGGCGA CCTGGTTGCG GCTCGTGGAA AATCTGGACA AGCTACGTGA TCCTGGGTCG
GTGGGGGCAT GGCTTGCCAC CACCGCGCGT CGAGAAGCCC TTGCCCTACT ACGCAACCGG
TGGGAGGTGC CGCTACCGGA GCTCACGAGG TCGGAGCTGA TGGACGAGTC GCAGCCGGAG
CCCTGGCAGC GGCTGGTCGC TGAGGAAACT GATGCGGAGT TGTGGCATGC GTACCGTCGC
TTGTCGATAC GCTGTCAGGA GCTACTGCGG TTGCTGGTGT TCGAGCCAGT GGGCAGCTAT
GCGATCGCTG CTGCGGCGCT CTCGGTGCCC ATTGGCAGTC TTGGCCCTTC TCGCGCCCGG
TGCCTGGCGA CGCTTCGGAC TCTGTTGAAT CAGCCGGCAC CGCAGCGACG TATCTAG
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| Protein sequence | MGPVGAVRCL SMSDDDAGRL VHAAAKGDQA AWEALVDRYA RLVYTVARGF RLDDADVADV
SQATWLRLVE NLDKLRDPGS VGAWLATTAR REALALLRNR WEVPLPELTR SELMDESQPE
PWQRLVAEET DAELWHAYRR LSIRCQELLR LLVFEPVGSY AIAAAALSVP IGSLGPSRAR
CLATLRTLLN QPAPQRRI
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