Gene Strop_3033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3033 
Symbol 
ID5059497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3464892 
End bp3465350 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content72% 
IMG OID640475283 
Productthioesterase superfamily protein 
Protein accessionYP_001159848 
Protein GI145595551 
COG category[R] General function prediction only 
COG ID[COG5496] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.61062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGTTC CGGGCGGTTC GGCTCAAGCG TGGCCTACCC GCTGTCCGAC GCCTAGGCTG 
GTGACCATGC AGGAGCCCTT CTCACCGGGC TCGACCGCCC GGGTGGAGCT GGTCGTCACC
GTCGCCGACA CCGCCCAGGC CATTGGCTCC GGCGACGTGC CGGTATTGGG CACGCCGCGG
ATCCTCGCCC TGGCCGAGGC GGCGACGGTC GCGGCGATCG CCCGCCAGTT GCCCAGTGGC
GCCACAACGG TCGGGGTCCG AGTCGAGCTG GACCACCAGG CTGCCACCCC AGTCGGCCGG
ACCGTGGTGG CACGAGCCCG GCTGGCGGAG GTCGACGGTC GGCGGCTGCT CTTCGCGGTC
TCCGTCACCG AGGATGGGTC CACCGTCGCC GAGGGGCGGG TGGAGCGACT CCTGGTTGAC
CGGCAGCGCT TTATCGAGCG GGCCGGGCGG TCGTCATGA
 
Protein sequence
MDVPGGSAQA WPTRCPTPRL VTMQEPFSPG STARVELVVT VADTAQAIGS GDVPVLGTPR 
ILALAEAATV AAIARQLPSG ATTVGVRVEL DHQAATPVGR TVVARARLAE VDGRRLLFAV
SVTEDGSTVA EGRVERLLVD RQRFIERAGR SS