| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2998 |
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| Symbol | |
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| ID | 5059462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3428709 |
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| End bp | 3429494 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475249 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001159814 |
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| Protein GI | 145595517 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTCG TTGACGAAGG CGACAGGAAA GATGAGCGAA CAATGACTAC GGTACTTGGC
GGCAAGGTGG CATTCGTGAC GGGCGGCAGC CGTGGCATCG GCGAGGCTGT GGCGCTGAGG
CTGGCAGCGG ACGGCGCCGA CGTCGCACTG ACCTACCGGG ACAGTGCCGA GCGCGCGGCA
GACGTCGTCG ACCGGATCAA GGCGCTGGGG CGCCGTGCCT GGGCGGTCCA GGCTGACAGT
GCGGACCCGA CGGCGATGCG TACGGCCGTA GATCGGGCCG TCGAGGAGTT CGGGCGGCTC
GACATCGTGG TCAACAACGC GGGGATTGGT GTGCTCGGTC CGGTCGAAGA CATGTCACTG
GAGGACATCG ACCGCGTGTT GAGTGTCAAT GTTCGGGCGC CTTTCGTGGC TTCCCAGGCA
GCGGTGCGGC ACATGACCGA AGGCGGAAGA ATCATCAACA TCGGCAGCTG CCTGGCCGAG
CGGGCCGCGC TCCCCGGCGT CGCGCTGTAC TCGACGAGCA AGACCGCGTT GATCGGCCTG
ACCAGGTCGT TGGCCCGCGA GCTGGGTGCC AGGGGGATCA CCGCCAACCT GGTCCATCCC
GGGCCGACGG AGACCGACAT GAACCCCGCC GACGGCGCGG GCGCCGACGT GCAGCAGAGC
CTCACCGCAC TTGGTCGCTT CGGCCAGCCG TCGGAGGTCG CCGCGACCGT CGCCCACCTC
GCGGGTGACG GTGGTCGCTA TGTCACTGGT GCCGCCATCG CTGTGGACGG CGGCTTCGCC
GCTTGA
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| Protein sequence | MSFVDEGDRK DERTMTTVLG GKVAFVTGGS RGIGEAVALR LAADGADVAL TYRDSAERAA
DVVDRIKALG RRAWAVQADS ADPTAMRTAV DRAVEEFGRL DIVVNNAGIG VLGPVEDMSL
EDIDRVLSVN VRAPFVASQA AVRHMTEGGR IINIGSCLAE RAALPGVALY STSKTALIGL
TRSLARELGA RGITANLVHP GPTETDMNPA DGAGADVQQS LTALGRFGQP SEVAATVAHL
AGDGGRYVTG AAIAVDGGFA A
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