Gene Strop_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2973 
Symbol 
ID5059437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3402918 
End bp3403826 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content69% 
IMG OID640475224 
Producthaloalkane dehalogenase 
Protein accessionYP_001159789 
Protein GI145595492 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.521193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCAC TGCGTACTCC GGACGGCCGG TTCACCAACC TGCCTGACTT TCCCTACGAG 
CCCCACTATG TCGACCTGGA CGGCCTACGA ATGGCCTACG TCACGGCCGG CCCCGCCGAT
GGGGAACCGG TACTGCTGTT ACACGGCGAG CCCAGCTGGT CATTCCTGTA TCGGAAGGTC
ATCCCGGTCC TCGCCGACGC CGGGCTGCGG GCCATCGCAC CGGATCTTAT CGGCTTCGGC
CGTTCCGACA AGCCGGCCGA GCGCAGCGCG CACAGCTACG CCCGACACGT CGAGTGGATC
CGCAGCTTCG CCTTCGACAA GCTGGGCCTG ACCGGAGTGA CGCTGGTCGG GCAGGACTGG
GGCGGCCTGA TCGGACTCCG CCTGGTCGCC GAGCACCCGG ACCGCTTCGC CCGGGTGGTG
GCCGCCAACA CCGGGCTGCC CACCGGCGAC CAGGCGATGC CAGAGCTCTG GTGGCAGTTC
CGTCGGATGG TCGAGGCAGC GCCCGAGCTG ACGGTGTCCC GCCTGGTGCA GTCGGGCTGC
CAGAACGAGC TGACCGAGGC GGTGCTGGCG GCCTACGATG CGCCGTTCCC GGACCAGTCC
TATCTCGCCG GCGTCCGTGC AATGCCCACC CTGGTACCGA CTGCACCGGA CGATCCAGCC
AGCACCGCCA ACCGCGCCGC CTGGGCCGAA CTCTCCCGTT GGGAGCGTCC GTTCCTGGTG
GCGTTCAGCG ACCAGGATCC GATCACCGGG GCGATGGCAC CGGTACTGCG CCGTACCGTG
CCGGGTGCTG CCGGATTCGA CCATCCGGTG ATCGAGGGAG CCGGGCACTT TCTCCAGGAG
GACGCGGGAG AGCAGCTCGG CAAGGTGATC GCGGAGTTCG TCCGGTCTAC CGCCGCGACC
ATGCCGTAG
 
Protein sequence
MSALRTPDGR FTNLPDFPYE PHYVDLDGLR MAYVTAGPAD GEPVLLLHGE PSWSFLYRKV 
IPVLADAGLR AIAPDLIGFG RSDKPAERSA HSYARHVEWI RSFAFDKLGL TGVTLVGQDW
GGLIGLRLVA EHPDRFARVV AANTGLPTGD QAMPELWWQF RRMVEAAPEL TVSRLVQSGC
QNELTEAVLA AYDAPFPDQS YLAGVRAMPT LVPTAPDDPA STANRAAWAE LSRWERPFLV
AFSDQDPITG AMAPVLRRTV PGAAGFDHPV IEGAGHFLQE DAGEQLGKVI AEFVRSTAAT
MP