| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2970 |
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| Symbol | |
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| ID | 5059434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3399305 |
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| End bp | 3400222 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475221 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001159786 |
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| Protein GI | 145595489 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.234131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATACA CCCGCGACCT GGTGCCAGAC CTGACCGGCA GAACGGCGGT GGTCACCGGC
GCGAACGGCG GTCTGGGGCT GGAGACCACG AAAGTGTTCG TCAGCCGGGG CGCGCACGTG
GTGATGGCGG TCCGTAATCA GGAAAAGGCA ACAAAGGCGG TTAAGGAGAT CCGGGAGGAG
ACCCCGACCG CGTCCCTGGA ACTGGTCGAG CTCGATCTCG GCTCACAGGC GTCGGTGCGG
AAGGCCGCCG AGAAGATCCT GGCCCGGCAC GACCAGGTCG ACATCCTGGT CAACAACGCC
GGGCTGATGG CAATGCCGGA GCGCCGGACC ACCGACGGGT ATGAGATGCA GTTCGGAGTC
AACCACCTCG GACACTGGAC GTTGACGGCG TTGCTGATGC CGGCGATCCT GGCCGCTCCC
GCCGCTCGGG TGGTGACCGT GACGTCGACA GCCCACCATT TCGGGCGCCC GGTGGACCCG
AACAATCCGC ACCTGAACGG CACCTACGGA CCGTGGCGCG CCTACGGCCA GTCCAAACTC
GCCAACTACC ACTTCGCTCT CGGTTTGCAG CAGGAGTTCG ACCGGGCCGG GGTGAACGCT
CAGAGCCTCG TCGCGCACCC GGGCCTGACC CGCAGCGACC TACAGCTCCA CACCGTTGAG
CAGGGTGGCG GCGGCTGGAT GGGCTCTTTC TTCGCCTGGA TCACCCGGCA CACCGGCATG
GGTGTCGCGA ACGGCGCAAT GCCCCAGATC CGCGCTGCCA CCGACCCGCA CGCCCGTGGT
GGCCAGTTCT ATGGCCCGCG GTTCGGCAAC CGCGGCCACG CCGTCCGGCT ACCGATCCTG
CGTCCGGGGG CCGACGCCGC GATCCACACG CTGTGGCAGG TCTCTGAACG GGAGACGGGT
GTCGCGCTCA CGGTGTGA
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| Protein sequence | MTYTRDLVPD LTGRTAVVTG ANGGLGLETT KVFVSRGAHV VMAVRNQEKA TKAVKEIREE
TPTASLELVE LDLGSQASVR KAAEKILARH DQVDILVNNA GLMAMPERRT TDGYEMQFGV
NHLGHWTLTA LLMPAILAAP AARVVTVTST AHHFGRPVDP NNPHLNGTYG PWRAYGQSKL
ANYHFALGLQ QEFDRAGVNA QSLVAHPGLT RSDLQLHTVE QGGGGWMGSF FAWITRHTGM
GVANGAMPQI RAATDPHARG GQFYGPRFGN RGHAVRLPIL RPGADAAIHT LWQVSERETG
VALTV
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