| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2954 |
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| Symbol | |
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| ID | 5059418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3374995 |
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| End bp | 3376890 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640475205 |
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| Product | glycerophosphodiester phosphodiesterase |
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| Protein accession | YP_001159770 |
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| Protein GI | 145595473 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.35594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCATC CTGCTGACCC GATCCTGACC CACGTCAGGG GCCGGACCCG CGGCGTAGCC
GCCCTCGTTG CTCTGGCCCT GTCGGCCGGT GTGCTCGTCG CGCTGGCCCC CGCCCCGCCG
GCCGTCGCCG GACCCGGCAC GGTCACCGTC TCCGAGGACT TCTCCTCCGG AACGCTTCCC
GCCGGGTGGC GGGCCGTCGA CGGCACCTGG AAGGTGGAGA ACGGCCGCCT GTACGGCACC
TCCACCAGCG CGGCGCAGAA CAACAAGATC ACCTTCGGGC GGCACCTGAA CGACTTCCGA
ATGGAGGCGA CGGTCCGCTT CGAGTCCGTC GCCTCGGCCA GCCGCTGGAC GGCGCTCGGC
CTCGACGTAC CCGCCGACGG CACCCCGCCC TGGTGGATCG CGACCATGCG CAGCGGCAGC
ACGGCGTCCA ACGGCCTGGA GTTCGCCCAG CGCACCGCCG CCGACACCTG GAACGTCACG
AACACCGGCT CCGCACCGTA CGCGGCCGGC ACAGGCCGGG ACGTCCGCGT CGCCGTCGAG
GTGCACGGCT CTCAGGCCCG CTGGTTCGTC GATGGGCGGG AGGCGCTGCG GACCACCAGC
CTCCAACGCT CCGCGAACGG TGGGCAGGCG CTCTTCGTCA ACGGTGCCAC GGTCTCCTAC
GACGACGTCA GCGTCACCGA ACTGGCACCC AATGGGTACC TGCGCCCCGA GGGCAGCCCG
CCGGCCGTGA TCGCCCACCG TGGCGCCTCG GCCGCCGCAC CGGAGAACAC GCTGGTGGCG
CAGGAGGTGG CCCGCCGGGC GAACGCCGAC TGGATCGAGA TCGACGTGCG GCCATCCCGC
GACGGGGTGC CGTTCGTGCT GCACGACGCC ACCGTGGACC GCACCACCGA CGGCACCGGC
CCGATTCGGA ACCTCACCGC CGTTCAGCTC AAGGCGCTCG ACGCCGGCTC GTGGTTCGCC
CCGCAGTATG CCGGCACGAC GCTACCTACC CTCGTCGAGC AACTCGCCGA CCTGCGTACC
CGCGGGGGCA ATCTGTTGCT GGAGATCAAG GGAGCACACA CCCGCGAGGA GGTCGCGACG
ATTGTCAGAG TGATCCGCGA GCAGCGGATG AGCCAGCGGG TCTTCGTTCA GAGCTTCGAC
GTGGCGGCGC TCCGGTACAC CAGGGAACTC GCCCCGGAGC TGCCGATCGG GCTGCTGCGG
GGCAGCCTGG ACGCGGACCC GGTCGCGGTC GCCGAGGACC TCGGTCTCAC CGCCTACAAC
CCGAGCGGCA AGGCGCTGCT CACCCGACCG GAGGTGGTGG CCGACCTGCA CGAGGCGGGA
GTGGCCGTCA TGGTGTGGAC GATCGACTCG GCGAACCAGT GGCGGTCGCT GGAGCAGGCC
GGCGTGGACG GGATCATCAC CAACCGGCCG GCGGAGCTCG CCGGCTGGAA CGCCGCGTAC
CTGCAGCGGC CGGCCGCCAC CCCGACCGTC GCGATCGTCT CGCCCGTCGA CGGCGCCGTC
CTGGATCGCG CCCAGGCTCC GGCCGTCTCG GTGATCGCGA CCAACGCCGA GACCGTCACG
CTGACCCTCG ACGGGAAGCG GATCGAGAAC GGCGGGAAGC TGGACCTCAC CGGACTGGCC
GCGGGCCGGC ACACGCTGCA CGCCGAGGCC GTGGGGTCGG CCGGTCGCGC GTCGGCGACC
AGCACCTTCA CCGTCGAGGT GACCCGAGCC GGTCTTGCGT ACGTGATCCT GAGCTCGGGT
GCTAACCGTG CGGCTCTGAA CGCGCTCAAC AGCCTGCTCC TCAACGAACG GTACGAGGCG
TTGGCGGCCT TCGCCACATG GCAGGCCGGT AAGGGTGTAC CCGCCGAGGT GGCATCGGTC
GTCGCCGCCG ACGCCCGCGT CCTCGGCGAG GACTGA
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| Protein sequence | MIHPADPILT HVRGRTRGVA ALVALALSAG VLVALAPAPP AVAGPGTVTV SEDFSSGTLP
AGWRAVDGTW KVENGRLYGT STSAAQNNKI TFGRHLNDFR MEATVRFESV ASASRWTALG
LDVPADGTPP WWIATMRSGS TASNGLEFAQ RTAADTWNVT NTGSAPYAAG TGRDVRVAVE
VHGSQARWFV DGREALRTTS LQRSANGGQA LFVNGATVSY DDVSVTELAP NGYLRPEGSP
PAVIAHRGAS AAAPENTLVA QEVARRANAD WIEIDVRPSR DGVPFVLHDA TVDRTTDGTG
PIRNLTAVQL KALDAGSWFA PQYAGTTLPT LVEQLADLRT RGGNLLLEIK GAHTREEVAT
IVRVIREQRM SQRVFVQSFD VAALRYTREL APELPIGLLR GSLDADPVAV AEDLGLTAYN
PSGKALLTRP EVVADLHEAG VAVMVWTIDS ANQWRSLEQA GVDGIITNRP AELAGWNAAY
LQRPAATPTV AIVSPVDGAV LDRAQAPAVS VIATNAETVT LTLDGKRIEN GGKLDLTGLA
AGRHTLHAEA VGSAGRASAT STFTVEVTRA GLAYVILSSG ANRAALNALN SLLLNERYEA
LAAFATWQAG KGVPAEVASV VAADARVLGE D
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