| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2875 |
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| Symbol | |
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| ID | 5059338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3287371 |
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| End bp | 3288363 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475127 |
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| Product | ThiJ/PfpI domain-containing protein |
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| Protein accession | YP_001159693 |
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| Protein GI | 145595396 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.276432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.168058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTAG AATCCTCGCA GCCAGTCGCT TCGACGCAGC CCCACCGCGT CGTCGTCATC
GTGGACGAGA ACTCGAACCC CTTCGAGCTT GGCTGCGCAA CCGAGGTCTT CGGTCTGCGT
CGACCCGAGG TCGGTCGCGA TCTGTACGAA TTCCGGCTCT GCTCGACCGA GCCGAGCACG
CTGATGCGGG ACGGCTTCTT CACCTTGACC GGCGTCTACG GTCTCGAGGC GGCCGACACG
GCAGACACCG TGATCGTCCC TAATCGGCCC GACACTGACG TTCCCCGCCG CCCTGCCGTA
CTCGATGCCA TACGGCGGGC ACACGCACGC GGTAGGAGAC TGGTCGGCTT CTGCAGCGGT
GCCTTCACCC TTGCCGAGGC CGGAGTGCTC GACGGGCGAC GGGCGACCAC ACACTGGCAG
TGGGCGGACT CGTTCCGGGA CCGCTTCCCG GCCGTCCGGC TCGAAGAGAA CGTACTGTTC
GTGGACGACG GCGACATCCT CACCGCTGCG GGCAGCGCGG CGGCCCTTGA CCTCGGGCTG
CACATCGTCC GCCGAGACCA CGGCGTGCAG GTCGCCAATT CGGTCAGTCG ACGGCTGGTC
TTCGCGGCAC ACCGCGACGG CGGCCAACGG CAGTTCATCG AGCGGCCCAT GCTCGACATT
CCCGACGAGT CCCTCGCGCC CACCCTGGCA TGGGCCCAGG AGCGGCTGGA CGCGCCGTTG
ACCGTTGCTG ACCTGGCGAG GCATGCTTCG GTCAGTCCGG CGACGCTGCA CCGCCGCTTT
CAAGCGCAGT TGGGCACAAC GCCGCTGGCC TGGCTCACTC GGGAACGCCT CAACCTGGCA
TGTCGACTGA TCGAGCAAGG TGAGTCACGC CTCGAGGTGG TCGCGCGGCA CAGCGGGGTC
GGCACCACCG CCAACCTGCG CACGTTGATG CGCCGCGAGA CGGGGCTAGC TCCCTCGCAG
TACCGGCGCC GGTTCAGCCC TGGAGCGGTC TAG
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| Protein sequence | MSLESSQPVA STQPHRVVVI VDENSNPFEL GCATEVFGLR RPEVGRDLYE FRLCSTEPST
LMRDGFFTLT GVYGLEAADT ADTVIVPNRP DTDVPRRPAV LDAIRRAHAR GRRLVGFCSG
AFTLAEAGVL DGRRATTHWQ WADSFRDRFP AVRLEENVLF VDDGDILTAA GSAAALDLGL
HIVRRDHGVQ VANSVSRRLV FAAHRDGGQR QFIERPMLDI PDESLAPTLA WAQERLDAPL
TVADLARHAS VSPATLHRRF QAQLGTTPLA WLTRERLNLA CRLIEQGESR LEVVARHSGV
GTTANLRTLM RRETGLAPSQ YRRRFSPGAV
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