Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2800 |
Symbol | |
ID | 5059263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3200337 |
End bp | 3201602 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640475053 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001159619 |
Protein GI | 145595322 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCCG AACTCTATCG AGATGCCGCC GACTTCTACC GGGACGCCCG CGCCGACCTG GTCGGGCCCC TGGACGGGGT CCGGGTGCTC GACGTGACCA AGGTGTGGTC GGGACCACTG GCCGGTGCCG TTCTGGCCGA CCTCGGTGCC GATGTCGTCC GGGTCGAGCT ACCGCACGGC CGTGACGGGG AGGTACCACC TCGGATCCCG GGCACGGGTC TGTCCTGGTT TCGGCAGACG GTCAACCGCA ACAAGCGCAG CGTCGGGCTC GACCTACGCC GGACCGAGGG GCGGGAGAGC TTCCTGCGGC TGGTCGCCAC CGCCGACGTG GTGGTGGAGA ACTACAAGCC CGGGACGCTG GATGGCTGGG GGGTGGGCTG GGCACAGTGC CGGGCGGTCC GGCCCGACCT GGTCCTCGTC TCGATCTCCG GATGGGGGCA GTTCGGGTCC CGCCGGGCGG AGGCCGCGTA CGACCCGGTC ATCCAGGCGG CCTCCGGCTG GATGGCGCTC AACGGCAGCC CAGAGGGGGG CCCGGTGCGC GCGCCGACGT TCCTCGCCGA CGAACTGGCC GGTCTACACG GTGCGCTCGG CGCGCTCGCG GCACTGTGGC ACCGGCAGCG GACCGGTGAG GGACAACACG TCGACGTGGC GATGTTCGAC ACCATGGTCG CCGGGAGCGC GGGCCTGCAC ACCCTTGCCG CGGCGGGCCG GCCGCCGCAG CGCTGGGGCA ACCAGACCGA CTTCGTGGTG CCGGCGAACG TCTACCCCTG CGTTGACGGG CAGGTCTACC TGGCTGTCGC GTTGGACCGG CACTGGCGGG AACTGGCCGA GGCGATGGGT CGGCCGGAGT TGGCCCGGGC GGAGGGTTTC GCCCGGGCCG CCGACCGGTT GGCCAACCGG GTCGAGGTGG ACGCGGTCCT CGCCCGGTGG TGCGCCACCC GGCCCGCCGA CGAGGTGGTC GCCGCCCTGG TGCGGCGGGG TCTGACGGCC TCGCGGGTAC GTACCGTCGC TGAGGTGGCT GCCGACCCGT ACTTGGCCGA GCGGGCGATG TTGCAGCCCA CCTCGCTGTG TGACGGCAGT ACCGCTCCGA TCGTGGGGCC GGCGGCGAAG TTCTCCCGTA CCCCGACCCG GGTCCGCCGT GGGGCACCCG AGCCCGGCGC GGACACCGCG CAGGTACTCG CCGAACTCGT CGCGCCCGAC ACCGGACACC AAAGCAAACA TACGACACCG CTTGCTGACG GGTGTGCCGA TGGTTCAGTA TGTTGA
|
Protein sequence | MAAELYRDAA DFYRDARADL VGPLDGVRVL DVTKVWSGPL AGAVLADLGA DVVRVELPHG RDGEVPPRIP GTGLSWFRQT VNRNKRSVGL DLRRTEGRES FLRLVATADV VVENYKPGTL DGWGVGWAQC RAVRPDLVLV SISGWGQFGS RRAEAAYDPV IQAASGWMAL NGSPEGGPVR APTFLADELA GLHGALGALA ALWHRQRTGE GQHVDVAMFD TMVAGSAGLH TLAAAGRPPQ RWGNQTDFVV PANVYPCVDG QVYLAVALDR HWRELAEAMG RPELARAEGF ARAADRLANR VEVDAVLARW CATRPADEVV AALVRRGLTA SRVRTVAEVA ADPYLAERAM LQPTSLCDGS TAPIVGPAAK FSRTPTRVRR GAPEPGADTA QVLAELVAPD TGHQSKHTTP LADGCADGSV C
|
| |