| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2788 |
|---|
| Symbol | |
|---|
| ID | 5059251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3190664 |
|---|
| End bp | 3191398 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640475041 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001159607 |
|---|
| Protein GI | 145595310 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGC GAACCCCCGC CGAGGAGCGT CTGCGGCGGC AGCGGCAGCT CGCCGCGACC
TGCCGGCTCT TCGCCCGCCT CGGCTTCGAT GAGGGCGCCG GTGGCCATGT GACTGCCCGC
GATCCGGAGC ACCCCGACCG GTTCTGGATC AACCCGTTCG GGATGCACTT CGGGCACGTC
CGCGTCAGTG ACCTGCTGCT TGTGGACCCG GCGGGTGCGG TGCTGGAGGG CGAAGGCCGG
ATCAACCCGG CTGGCTACGT CATCCACTCC CACGTGCACG CCGCCCGTGC GGACACGGTG
GCCGCCGCGC ACACCCACTC GACCTATGGT CGGGCATGGT GCACTCTCGG CCGTCCGCTG
AGCCCGATCA CGCAGGACGC CTGCGCCTTC TACGAGGATC ACGCGGTTTT CGACGACTAC
ACCGGGGTGG TGTTGGCCGA CGACGAGGGC AAGCGGATTG CCGAGGCGCT CGGGCCGGCC
AAGGCGGTGA TCCTGCGTAA CCACGGGCTG CTCACCGTGG GTGGGTCCGT CGCCGAGGCG
GCCTGGTGGT TCATCACGAT GGACCGTAGC TGTCAGGTGC AGTTGCTGGC CGAGGCGGCC
GGCAGTCCGG TGCCCATCGA CCACGGGGCC GCCGCCGCGA CGCGCGACAC GATCGGCACG
CCGGAGATCG CCCGGCTGAA CTTCCGCCCG CTGTACGCCG ACATCGTCCA CGAACAGCCG
GACCTCCTGA ACTGA
|
|---|
| Protein sequence | MTGRTPAEER LRRQRQLAAT CRLFARLGFD EGAGGHVTAR DPEHPDRFWI NPFGMHFGHV
RVSDLLLVDP AGAVLEGEGR INPAGYVIHS HVHAARADTV AAAHTHSTYG RAWCTLGRPL
SPITQDACAF YEDHAVFDDY TGVVLADDEG KRIAEALGPA KAVILRNHGL LTVGGSVAEA
AWWFITMDRS CQVQLLAEAA GSPVPIDHGA AAATRDTIGT PEIARLNFRP LYADIVHEQP
DLLN
|
|---|
| |