| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2765 |
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| Symbol | |
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| ID | 5059228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3114953 |
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| End bp | 3116707 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640475019 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001159585 |
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| Protein GI | 145595288 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.564346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0051414 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTACAG CGCAGGCAAA GGCCGGTCGC CGCGAGTGGA TCGGTCTCGC GGTACTCGTC
CTGGTGACAC TGATCATCAG CATGGACATG ACCGTGCTGT CGTACGCTCT GCCGTTCATC
ACAGCGGACC TTGCGCCGAC CAGCAGCCAA CTCCTCTGGA TCACGGATGT CTACGCCTTT
GTGCTGGCCG GCCTGCTGAT TCCGATGGGG ACGCTGGGGG ACCGGATCGG GCGTCGCCGG
CTGCTGATGA TCGGCGCGGC GGTGTTCGGT GTGGCATCCG TGGCCACGGC CCTGTCCAAC
AGTCCCGGCA TGCTGATCGG GACCCGGGCG GTGATGGGCG CCGCCGGTGC GACGCTCATG
CCGTCGACCA TGTCGTTGAT CCGCAACATG TTCCACGACG AGAACGAGCG ACGGGTCGCG
ATCGGGGTCT GGGCGGCTGG CTTTTCCGCC GGTGGGGTCA TCGGCCTGGT GGCCGGCGGC
GCACTGCTCC AGTACTTCTC CTGGGGCACC GTTTTCGAGA TCAACGTGCC GATCATGCTG
CTCCTGCTCA TCCTGGCGCC GTTGCTGCTG CCCGAGTTCC GCAACGCGGC CGCCGGGCGG
CCCGACCTGC TGAGCACGGT GCTGGCGTTC GTCGCGGTGC TGCCCATGAT CTGGGGCATC
AAGCAGTTCG CCGAGGACGG CATGGACTGG CCGCCGGTGG CCGGCGTGGC CGCCGGACTG
ATCTTCCTGG CCGTCTTCGT GCTGCGTCAG CGGCGCCTCG ACGACCCGGT GATCGACGTC
CGGCTGTTCC GTGCCCCGGC GTTCAGCGCA GCGGTGGTGA TGAATCTGCT CGCCAACTTC
GCGCTGGTCG GGTTCATGTT CTTCATCAGC CAGTACCTCC AGTTGGTGCT CGGGTTGCGC
CCGTTCACCG CCGGCCTGTG GTCACTGCCG GCCGCCGGTG CGGCGGGCGT CGGCGCGGCC
GTGCTGGCCC CGGTGCTCGC GCAGCGCTTC AAGCGCGCCT ACGTCGCCGC CGGCGGCCTG
TTGGTGGCGA CCGTCGGTTG CGTGGTGCTC GCCCAGGTCG GCGACGAGTC GGGCCTGGCC
CTGGTGGTGC TCGGCCAGGC GTTGATGGCG GGTGGCGTCG CCATGGTGCT GACCCTGAGC
GCCGAGCTGA TCGTCTCCAC CGCGCCCCCG GAGCGGGCCG GCGCCGCCGC CGGACTCTCC
GAGACCGGCA GTCAGTTCGG TGCGGCGCTC GGCGTCGCGA TTCTCGGCAG CATCGGCGCG
TACGTCTACC GGCGGAAGCT CTCCGGCGTA GCACCGGACG GGGTGCCACC GGACTCCTGG
GCCACCGCCC GGGAGACCCT TGGCGGCGCG GTCGAGGAGA GCCGGACGCT CTCCACGACC
GCGGCAGACA CCCTGGTGAC GCTGGCGCGG GCGGCGTTCA CCGACGAGTT GCGGGCAGCC
GCGATCGTGT CGGCCGGCAT CCTGCTGGTG ACGGCGATCT TGGCGGCCGT GCTGCTGCGC
AACGTGGGCG GGTCGGTGCC CGGGCAGGGC CTGTCCGACG GGTCGGACGC CACGCCCGCC
CTGACCACCG ACGGCGCGAC CCACCTCGAG GGGCCCGTGA CCGCCGCCGA TGCAACCTTG
GTCGACGCGG TACCGCCGGC GACCGAGGTC GTGCCGACCG GAGCGACCAC CGATGCCGAT
TCGGGCCCGG CGGTTCGGAA CGGTCCGCAG CCGGCCGCCC CGGTCGCCAC CCGGCCGACC
CACCCGACGG TCTGA
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| Protein sequence | MATAQAKAGR REWIGLAVLV LVTLIISMDM TVLSYALPFI TADLAPTSSQ LLWITDVYAF
VLAGLLIPMG TLGDRIGRRR LLMIGAAVFG VASVATALSN SPGMLIGTRA VMGAAGATLM
PSTMSLIRNM FHDENERRVA IGVWAAGFSA GGVIGLVAGG ALLQYFSWGT VFEINVPIML
LLLILAPLLL PEFRNAAAGR PDLLSTVLAF VAVLPMIWGI KQFAEDGMDW PPVAGVAAGL
IFLAVFVLRQ RRLDDPVIDV RLFRAPAFSA AVVMNLLANF ALVGFMFFIS QYLQLVLGLR
PFTAGLWSLP AAGAAGVGAA VLAPVLAQRF KRAYVAAGGL LVATVGCVVL AQVGDESGLA
LVVLGQALMA GGVAMVLTLS AELIVSTAPP ERAGAAAGLS ETGSQFGAAL GVAILGSIGA
YVYRRKLSGV APDGVPPDSW ATARETLGGA VEESRTLSTT AADTLVTLAR AAFTDELRAA
AIVSAGILLV TAILAAVLLR NVGGSVPGQG LSDGSDATPA LTTDGATHLE GPVTAADATL
VDAVPPATEV VPTGATTDAD SGPAVRNGPQ PAAPVATRPT HPTV
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